Id Trinity | TRINITY_DN48587_c3_g2_i3 |
---|---|
Name Transcript | Ll_transcript_337620 |
Sequence | CAGGTTGTGGAAGCAGTGGATTCCTTGTATTCAGAGTTCAGGGCTGTTGATAATTTGGTTGCTTGCAATACAACACGCGTCCTTAAAGCTTTCCAGAATG CACATGTTGGATCTCATGTAAGCATGCCCATGGGTTTAAGGCTAATTATAATTATTCACAATTATGATTGGAATTGGTAAATCATTCTTTTGAGCCACTT GGCAGATTCTGATGTGCTTTTTGAAAATAATAGAGTCGTAGTGAGAGAGTCGAGAGAAGGGATAAGTGGTAAAGTAGAGTATAAGGGGAAAGCGAAGTTT TGTAATCAATTGATTTGCTTTTAAGCTGAAGTGAAACTGACTATATGAAATGCATATTTAGTAAGATGCGTGTTAGCACTGACTTAGATGTGAAAATTAG AGGTCAACCCATATAACAAGTCACATAATTGAGGTGCCAGTAGTTTTATGATGCAGACTGATGGAGAAATAGAGGGAGGTGTAAATCATATGATTCAAAT GGGTGGATAAAGTGTTATCAAAAGTTACCTATCAAACTAGAAGAAAAGTTTAAAATGGTATGCTTTATGGTACTGAATACTGATACTGAATGTTTGCTAG TAAAGTTCCAACAATGGCATATGGAGAGTGTGGCAGAGATGAGATTGTTGCAGACGTACAAGAAAAGATAGGAATAATATTAGGAATTAACATATTATAT GATAAGTAAGAGTTACCTATTGAGGAAAAGATGGAATAAGTATGTGTAAGATGGTGTAGATGTTGAGAACATTAGTAGAAGCCTCTGTTAGAAGAGTCGA CCATATGAAAATAGGAGAGGAAACCCAAGAAAACTCTAAGTGGAACCATTAGAAAGAATTTATACCTAAAGGCCTATAAAATTATTTGGGTTTTGGTAGA ACATGGTGATTCATTTCATGATCCATTTAGCCTCCGTCACCTAGTGAGAAAAGACTTCGATTGTTGTTGGATAGATTATGATAGTAGTGAATTATTTGGG CAATTTGAGCAAAAGCATTCAAAAGTAGGAAACTCATACCTTAATGCCTTTAAAGACAGTTTTTTTGTGCTCTATCATAAATTCAATAGTAAGGTGATTG ATTGTGTAGTTCCATGTGTTGGACCAGACTGCAACCGGGGAGTTACAATGTTACCAGGGTATGTGAAGAGTGGAAAGCCACAAGTGAGACACCACGTCTT GAACTAAAACCTTAAGGCATTAGTTCCATGGGCTTTTCCTACATATAAACTCTTTCACTCTTCCCCACATATCCAATGTGGGACTTCACACTTGAATAAA CCCAACACCATGTTTAATCACTATTATCTTTTTTTAATGTAAATTACCATTCTGTTTGAAGCCCTTGGCAGTTGATACAATCAGATAGCCGTACTTATTT GTTTTAAGAGTTATTTTCTGTATTTTGCGATTTTAATTGGTCGTTGTCATGCACATTAAATATTAATATCAGCACTTTGGTGGTTGCACTGGTTATGGCC ATGATGAAGCTGGGGGGCGTGAGGCTCTTGACCAGGTTTTTGCAGAAATTGTTGGGGCTGAATCAGCTATTGTTCGTTCACAGTTCTTCTCAGGTACTCA TGCTATCACATGTGCTTTATTTGCCCTCTTGAGGCCTGGGGACGAGCTTTTGGCAGTTGCTGGCGCTCCCTATGATACCCTAGAGGAAGTAATTGGGAAA AGGGACTCTGGTGGATTGGGCTCCCTCCAAGATTTTGGGGTGAAGTACCGCGAAGTTCCACTTGCTGAGGATGGTGGACTTGATTGGAATGCACTGATGG TTGCTGTCAAACCCGAAACAAAATGTGCACTCATACAAAGGTCATGTGGCTATTCATGGCGTCAGAGTTTGAGTGTTAGTGACATAGGGAAGGCGATAAA AATAATCAAAATGCAAAATCCTGGCTGCTTAGTCATGGTGGACAATTGCTATGGTGAATTTGTCGAAAGCATTGAACCTCCCATGGTGGGCGCAGATCTG ATTGCAGGCAGTTTGATAAAGAATCCGGGTGGAACAATTGCACCATGTGGTGGATATGTTGCTGGGAGAAAAAAATGGGTTGAGGCAGCTGCTGCTCGTC TTTCTGCACCTGGGCTTGGTGTGGATTGTGGTGCAACCCCTGGTGATATCATGCGAGCCTTCTTCCAAGGATTATTTCTTTCGCCTCAAATGGTTGGGGA AGCAATCAAGGGTTCCCTCCTGATTGCTGAAGTTTTGGCATCTGAAGGCTATAAAGTACAGCCACTTCCTCGTGTCCCCCGAAGTGATACTGTTCAGGCT GTACAGCTTGGGAGCCGTAAGCGTCTTCTTGCTTTCTGTGAAGCTGTTCAAAGAAGCTCTCCTGTAGGTTCATATACCAAACCAGTTGCTGGTACCACTC CTGGATATGCATCAGAGGTGATCTTTGCTGATGGAACCTTCATTGATGGGAGTACTAGTGAGCTTTCATGTGATGGCCCTCTTAGAGAACCATTTGCTGT ATTCTGCCAAGTAGGTTCATTTATATCATATATTACTACCTATGATTTACCCTTATTCTTTATGGCTGATTTCTGAACACTACACTACACTTTTGGTTAT TTTTCTTTATTTAAAGTTTCAATTCGGTCCTTTATTTAATAAAGGACTAATAGTGTAATGTAACCTTCTCAGAATATGATCTTAATTCATTTTCCAAATG CAGGGTGGCACCCATTGGACTCAATGGGGACTAGTCCTAGCAGAAGTTTTGAAATCTATAGATGGAATATAATTTTTTGTCAGTAACTTCATATTCAAAG GATGATATAAATTTAGATTGGTACAATTATATAACACAAGAAATTATTTGTGTATAACAAGATCACTGGACTACTGCTGAGAGGAACAACAAGTAAAGCT TATTTTTGGAGTCTGGTCCAGCATTGTGTAGGTTCTGTTATTTTTTTTACCTCGTTGAAAAGGAGCTGTTATTCATAGTCTTCTTACACTAGTAGATTAA TTGATATCTAGTGTTTATCTCGATTATTACACCATATTTTCTGTCAGAAGCAAGCTTCCTGTGATTATTAGATTTGACTCTCAGTACTGTTTTCCTGATC CATTTCAATATACTGATTTTCACâBLAST |
Tissue | pods |
Gene name | LI_gene_162331; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337620
Blastp | Uncharacterized protein YnbB from Bacillus with 43.5% of identity |
---|---|
Blastx | Uncharacterized protein YnbB from Bacillus with 45.51% of identity |
Eggnog | aluminum resistance protein(COG4100) |
Kegg | Link to kegg annotations (BSU17440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453605.1) |
Pfam | Methionine gamma-lyase (PF06838.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |