| Id Trinity | TRINITY_DN48587_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_337622 |
| Sequence | CAGGTTGTGGAAGCAGTGGATTCCTTGTATTCAGAGTTCAGGGCTGTTGATAATTTGGTTGCTTGCAATACAACACGCGTCCTTAAAGCTTTCCAGAATG CACATGTTGGATCTCATGTAAGCATGCCCATGGGTTTAAGGCTAATTATAATTATTCACAATTATGATTGGAATTGGTAAATCATTCTTTTGAGCCACTT GGCAGATTCTGATGTGCTTTTTGAAAATAATAGAGTCGTAGTGAGAGAGTCGAGAGAAGGGATAAGTGGTAAAGTAGAGTATAAGGGGAAAGCGAAGTTT TGTAATCAATTGATTTGCTTTTAAGCTGAAGTGAAACTGACTATATGAAATGCATATTTAGTAAGATGCGTGTTAGCACTGACTTAGATGTGAAAATTAG AGGTCAACCCATATAACAAGTCACATAATTGAGGTGCCAGTAGTTTTATGATGCAGACTGATGGAGAAATAGAGGGAGGTGTAAATCATATGATTCAAAT GGGTGGATAAAGTGTTATCAAAAGTTACCTATCAAACTAGAAGAAAAGTTTAAAATGGTATGCTTTATGGTACTGAATACTGATACTGAATGTTTGCTAG TAAAGTTCCAACAATGGCATATGGAGAGTGTGGCAGAGATGAGATTGTTGCAGACGTACAAGAAAAGATAGGAATAATATTAGGAATTAACATATTATAT GATAAGTAAGAGTTACCTATTGAGGAAAAGATGGAATAAGTATGTGTAAGATGGTGTAGATGTTGAGAACATTAGTAGAAGCCTCTGTTAGAAGAGTCGA CCATATGAAAATAGGAGAGGAAACCCAAGAAAACTCTAAGTGGAACCATTAGAAAGAATTTATACCTAAAGGCCTATAAAATTATTTGGGTTTTGGTAGA ACATGGTGATTCATTTCATGATCCATTTAGCCTCCGTCACCTAGTGAGAAAAGACTTCGATTGTTGTTGGATAGATTATGATAGTAGTGAATTATTTGGG CAATTTGAGCAAAAGCATTCAAAAGTAGGAAACTCATACCTTAATGCCTTTAAAGACAGTTTTTTTGTGCTCTATCATAAATTCAATAGTAAGGTGATTG ATTGTGTAGTTCCATGTGTTGGACCAGACTGCAACCGGGGAGTTACAATGTTACCAGGGTATGTGAAGAGTGGAAAGCCACAAGTGAGACACCACGTCTT GAACTAAAACCTTAAGGCATTAGTTCCATGGGCTTTTCCTACATATAAACTCTTTCACTCTTCCCCACATATCCAATGTGGGACTTCACACTTGAATAAA CCCAACACCATGTTTAATCACTATTATCTTTTTTTAATGTAAATTACCATTCTGTTTGAAGCCCTTGGCAGTTGATACAATCAGATAGCCGTACTTATTT GTTTTAAGAGTTATTTTCTGTATTTTGCGATTTTAATTGGTCGTTGTCATGCACATTAAATATTAATATCAGCACTTTGGTGGTTGCACTGGTTATGGCC ATGATGAAGCTGGGGGGCGTGAGGCTCTTGACCAGGTTTTTGCAGAAATTGTTGGGGCTGAATCAGCTATTGTTCGTTCACAGTTCTTCTCAGGTACTCA TGCTATCACATGTGCTTTATTTGCCCTCTTGAGGCCTGGGGACGAGCTTTTGGCAGTTGCTGGCGCTCCCTATGATACCCTAGAGGAAGTAATTGGGAAA AGGGACTCTGGTGGATTGGGCTCCCTCCAAGATTTTGGGGTGAAGTACCGCGAAGTTCCACTTGCTGAGGATGGTGGACTTGATTGGAATGCACTGATGG TTGCTGTCAAACCCGAAACAAAATGTGCACTCATACAAAGGTCATGTGGCTATTCATGGCGTCAGAGTTTGAGTGTTAGTGACATAGGGAAGGCGATAAA AATAATCAAAGTATGGTTCTGAATGTGCTCTTGCTTTGAAATATAGCATTATACTTTTCAGTTAGTATTATTCTAGCCAAGTTACTACTATAAATCCCCT TTATTTTTTATCATGAAATTTTCACTTTATGGCATGTCATCTCATTTTTCAGTGCAGAGATGCCAGGAGGGAATGAGATACCAAAGACACATATTAGGAT TCTGCGCATTGTACAAAATAGCGTCTTAATAATCAATTAGTTTGTGCTATTCTCCTGTAACTTTCTACTCATGAAACCATCATCCTATGACAGCTTCTCG TCAACATTTACATACGCACAACCATGTTTTCTCATTTAAAAAGGAAAAAAAGAAAACCAGAGTGATATTACTGTTCTTATAAGTACATAGCAGAACATAT TGTCTCCTTTAACCTTTTAATTCATGGTATTTTTTCACTCCATGATATGATCTTGCGCATATTTATATACAGATGCAAAATCCTGGCTGCTTAGTCATGG TGGACAATTGCTATGGTGAATTTGTCGAAAGCATTGAACCTCCCATGGTGGGCGCAGATCTGATTGCAGGCAGTTTGATAAAGAATCCGGGTGGAACAAT TGCACCATGTGGTGGATATGTTGCTGGGAGAAAAAAATGGGTTGAGGCAGCTGCTGCTCGTCTTTCTGCACCTGGGCTTGGTGTGGATTGTGGTGCAACC CCTGGTGATATCATGCGAGCCTTCTTCCAAGGATTATTTCTTTCGCCTCAAATGGTTGGGGAAGCAATCAAGGGTTCCCTCCTGATTGCTGAAGTTTTGG CATCTGAAGGCTATAAAGTACAGCCACTTCCTCGTGTCCCCCGAAGTGATACTGTTCAGGCTGTACAGCTTGGGAGCCGTAAGCGTCTTCTTGCTTTCTG TGAAGCTGTTCAAAGAAGCTCTCCTGTAGGTTCATATACCAAACCAGTTGCTGGTACCACTCCTGGATATGCATCAGAGGTGATCTTTGCTGATGGAACC TTCATTGATGGGAGTACTAGTGAGCTTTCATGTGATGGCCCTCTTAGAGAACCATTTGCTGTATTCTGCCAAGTAGGTTCATTTATATCATATATTACTA CCTATGATTTACCCTTATTCTTTATGGCTGATTTCTGAACACTACACTACACTTTTGGTTATTTTTCTTTATTTAAAGTTTCAATTCGGTCCTTTATTTA ATAAAGGACTAATAGTGTAATGTAACCTTCTCAGAATATGATCTTAATTCATTTTCCAAATGCAGGGTGGCACCCATTGGACTCAATGGGGACTAGTCCT AGCAGAAGTTTTGAAATCTATAGATGGAATATAATTTTTTGTCAGTAACTTCATATTCAAAGGATGATATAAATTTAGATTGGTACAATTATATAACACA AGAAATTATTTGTGTATAACAAGATCACTGGACTACTGCTGAGAGGAACAACAAGTAAAGCTTATTTTTGGAGTCTGGTCCAGCATTGTGTAGGTTCTGT TATTTTTTTTACCTCGTTGAAAAGGAGCTGTTATTCATAGTCTTCTTACACTAGTAGATTAATTGATATCTAGTGTTTATCTCGATTATTACACCATATT TTCTGTCAGAAGCAAGCTTCCTGTGATTATTAGATTTGACTCTCAGTACTGTTTTCCTGATCCATTTCAATATACTGATTTTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_162331; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337622
| Blastp | Uncharacterized protein YnbB from Bacillus with 43.75% of identity |
|---|---|
| Blastx | Uncharacterized protein YnbB from Bacillus with 42.72% of identity |
| Eggnog | aluminum resistance protein(COG4100) |
| Kegg | Link to kegg annotations (BSU17440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453605.1) |
| Pfam | Methionine gamma-lyase (PF06838.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |