Ll_transcript_337380

• Id Trinity: TRINITY_DN48589_c1_g1_i2
• Name Transcript: Ll_transcript_337380
• Sequence: GAAACTAATAGCAATTGCAGCAATAACACCGATGAAGAAGTTCATGATATTTCTTCCGATTCAGATTTCAATTGTGAAGATGAAGAGTTCAGTGTGAACT TCATTCCTGACTTGAATGAAGAACCAACTTCAAGCATTGGTGTTTCTGATGAAGAAGATATTCTTTCTGACTCATATGATGCTATAGAACCGTTATTTAA TAGTGGAAAGTCGCAGTCTAGAAGGAAAAGAAAAAAATCTGACTTCGGAGAACCAAGTGATGTAGAGAGAGTGGTTGAGAATGGGGATGATGAGGAACAT TTGATGGCTTCTCAGCAATCAGACCCCATTGATTTGACCAAGACAAGAAAGAAGAAAAAAGGGAAAAGGCCAAGAAAGGAAGATTCAAAGCCAGTGTTAT TGTGGCATGCTTGGGAAGAGGGGCAAGAGAGATGGGTTGATGAGAATTTGTTGGAAGATTTTGACATAGATCATCAGAGTGAAATAATGAATGAAACTGT CGAGCCATCCTCAGATCTGACTATGCCTTTGCTAAGGTATCAAAAGGAATGGTTAGCATGGGCTTTGAAACAGGAAAGTTCCGTGACTAAAGGAGGAATC CTTGCTGATGAAATGGGAATGGGGAAGACTATTCAAGCAATTGCTCTTGTCCTTGCCAAACGTGAATTCCACCAGATTAGTTGTGAAGCAGATGAACCAT CATCTTCACCAGGTTCATCTACCGTTTTGCCTGCCATCAAAGGCACACTTGTCATCTGTCCTGTGGTTGCTGTCACTCAATGGGTTAGTGAGATTGATCG TTTTACTTTGAAAGGAAGCACCAAGGTGTTGGTTTATCACGGGGCAAAGAGAGAGAAGAGTGGTGAACAGTTCTCAGAGCATGACTTTGTAATAACAACA TACTCTATTGTGGAGTCTGAGTACAGAAAGCATATGATGCCTCCTAAGGAGGAGTGCCAATATTGTGGAAAATTATTTAACCCAAGGAGTTTAACTTCTC ATCAGAGGTATTTTTGTGGGCCTGGTGCTACTAGAACAGATAAACAAGCGAAGCAAATAAAGAAAAAGAAAAGAGATCTTACTAAGAAGAAGCTCAAAGA ATTGAAGTCTTGGGACGGAGAATTGGAAAAGGGTTTTATGAAGAAAAAGAATTTGGAATTGCGGTCGAGAACAAAAGATTCAGATACCAAAGACAGGGAA AAGTCATTTCTACATGCTGTGAAGTGGCAGCGTATCATACTGGATGAGGCACACTATATAAAATCTAGACATTCTAACACTGCAAAAGCAGTTCTGGCTT TAGAGTCCTCCTACAGATGGGCATTAAGTGGCACTCCCCTTCAGAACCGGGTTGGTGAGCTGTATTCTTTGGTGCGATTTCTGCAAATTACTCCTTATTC ATATTACTTATGCAAGGACTGTGATTGCAAGATACTTGATCATAGCTCCTCTAGACAATGTTCAAACTGCAACCACAGTTCTGTTAGACATTTCTGTTGG TGGAACAAATATGTCGCCACACCAATTCAGTCATATGGGTATGGCGATTGTGGAAGAAGAGCTATGATATTGCTTAAACACAAAGTTTTAAAGAACATAG TTCTAAGGCGCACTAAAATCGGCAGGGCTGCCGATCTTGCACTTCCGCCTAGAATTGTTTCATTAAGGAAGGATAGCCTGGACATAAAAGAGCAAGACTA TTATGAATCGTTATACAATGAGAGTCAGTCACAGTTTAATACATATGTCGAAGCAAATACTCTCATGAATAACTATGCTCATATATTTGACCTCCTCACA CGATTGCGTCAGGCTGTTGATCACCCATATCTTGTGGTATATTCTGCAACTGCAGCATTAAGAGGTGGGAATTTAGCAGGTAATGGTAATGTTCAACAAG AATGCGGCCTTTGTCATGATCAAGTAGAAGATCCTGTGGTTACCTCTTGTGAGCATATTTTTTGCAAGTCATGCTTGATAGAGTTTTCTGCTTCCTTGGG ACAAGTATCATGCCCCTCATGCTCTAAATTGCTTACTGTTGATTTAACTTCCAACATGGTTGCTGGGGCTCATGCTAATAAAACAACAATTAAGGGTTTC AGATCCTCAAGCATTTTAAACAGAATTCAGCTCGAAAATTTCCAGACAAGCACTAAAATAGAGGCATTGAGAGAAGAAATCAGATTTATGGTTGAAAGGG ATGGTTCTGCCAAAGGGATTGTTTTTAGCCAGTACACATCATTCTTGGATCTCATAAACTATGCCCTGAACAAGTCAGGCGTATCTTGTGTTCAATTGAA TGGACAAATGTCATTGTCTGCTCGGGATGCTGCCATAAAGAGGTTTACCGATGACCCTGAATGCAAAATTTTTCTCATGAGCTTGAAAGCAGGAGGAGTT GCTCTCAATTTGACAGTAGCATCGCATGTTTTCCTTATGGACCCTTGGTGGAACCCTGCAGTGGAGCGTCAGGCTCAAGACAGAATTCACCGAATAGGGC AATACAAACCAATCAGAATTGTAAGGTTTGTCATTGAAAACACAATTGAGGAGAGGATTTTGAAGTTGCAAGAAAAGAAGGAACTAGTGTTCGAAGGGAC TATTGGTGGTTCTTCTGAGGCTCTGGGGAAATTGACGGAGGCTGACTTGAAATTTCTCTTCGTTACCTAAGCAGGCGTGGCCTGTTCTTTTCACAGGAAG ATCTATTTACTACTTACCTGATATACATTTGCTTGAACCATTTTTGTATGATATCATATAGGTGCCACGTATCATTCAATTATATATATATATATGCGCA GTAAAAATGTGTTACTGTATAACTATATAGCTCAGAGGTTGCCTTTGACAATGCTGTTGAAAGCCAAATGTAATTTTGAGAGATGTATATATACTATAAG GAAGTTTATATATTTATATATTTATATTACAGAGTAGTACTAGTAGTTGGTTGATGTTTACGTGGCAGATGGTTTAATCGAATAAGATAGGGAGAGTATC CTAAACTCAATTTGCTACACCAAGCAGCTGGCTCCACTTTAAGGCATACACTATACCTGTATCGCATTCTGCTAACTATAGAATGCAAACATTTTATGTC CTACTCCTGGAGCAATGTGTGAGTGGAACACCTGAAGAAATTATGAATGAAAAAACATTGAGGGTGATGCACTTATGCACTCATAACAATTAACGTTAGA ATTTCTGCAAACCATTAGATTTTTCCTGGGTCATTTGTGTTCTGAGACGAAGTAAGCTCATTTGAATAAAATGCACAAATTTAAATTATACATAATAATC ATACGGGACACCCGACTCTAGAATTAGTTTCTCG
• Tissue: pods
• Gene name: LI_gene_162342;
• Additional information: details;

Expression of Ll_transcript_337380

FPKM

• PAB: 0.3
• PNAB: 2.3
• PS1: 3.2
• PS2: 2.1
• PS3: 3.8
• PW1: 3
• PW2: 3.3
• PW3: 4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337380

• Blastp: ATP-dependent helicase rhp16 from Schizosaccharomyces with 47.17% of identity
• Blastx: ATP-dependent helicase rhp16 from Schizosaccharomyces with 47.17% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413600.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;