Ll_transcript_336658

• Id Trinity: TRINITY_DN48591_c3_g1_i14
• Name Transcript: Ll_transcript_336658
• Sequence: GTTTATATTAAGCATTGGAGTTTTGTTATCTGAAAAGAATTGAGGTGTGGGTATGGAGTTAGGATCATCAGAAGAAGATGCAAGAGAAGAACAGCAATGT CTCTACGAAGCTTACAACGAACTTCACTCTCTTGCTCAAGATCTCCACACTCCCTTCGACGCCCCCGCCGTCCTTGTCGTCGGCCACCAGACCGACGGCA AGAGCGCCTTAGTTGAAGCCCTCATGGGTTTTCAGTTCAACCATGTCGGCGGCGGAACCAAAACTCGCCGCCCCATCACCCTCCACATGAAGTATGAACC TCAATGTGATTCTCCTCACTGTTATCTTCTCTCTGATCTTGACCCTACTTTGTATCATCATAAGTCTCTCCCTCAAATTCAGGCATATATTGAAGCTGAA AATGTGAGGTTGGAGCATGATTCTTCCCAGTTCTCAGCTAAGGAAATAATTATTAAAGTGGAATACAAGTATTGCCCAAATCTTACAATCATAGACACTC CTGGGCTTATTGCTCCTGCTCCAGGTCGAAAAAACAGGGCATTGCAGGCCCAGGCACGTGCAGTGGAGTCTCTTGTGCGAGCAAAAATGCAACACAAGGA GTTTATTATATTGTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGACGCATTGTAATGCAAATTGATCCTGAGTTGTCAAGGACTGTAATT GTCTCAACCAAGCTCGATACCAGGATACCTCAATTTGCACGTCCTTCCGATGTTGAAGTTTTCCTTTCACCTCCTGCATGTACACTTGATAGCTGCATTT TGGGCGACTCTCCCTTTTTCACGTCTGTGCCATCAGGAAGAGTTGGTTCTGGAAGTGATTCTCTCTACAGGTCCAATGATGAGTTCAAACAGGCTGTATG CTTCAGAGAGATAGATGACGTTGCTGCTTTGGAAGAAAAGTTGGGCAGACCATTGTCTAAGCAAGAAAGGAGCAGGATAGGTGTGAGCAAACTTAGGTTT TTTTTGGAAGAACTGCTACAAAAGAGGTATATAAGGAGTGTACCACTGATCATTCCACTTCTTGAGAAACAGTACCGGGGTGCGACAAGAAAGTTGAGTG ATATAAATCAAGAATTGAGCACACTAGATGAATCCAAACTGAAGGAGAAAGGAAGAGCCTTCCATGATCTGTTCTTGACCAAGTTGTCATTGCTGCTTAA AGGGACAGTTGTCGCACCTCCTGATAAGTTTGGTGAAACACTACAAGATGAACGAATAAATGGAGGTGCATTTGTTGGTGCTGATGGTGTTCAGTTCCCT CCCAAGCTAATACCTAATGCAGGAATGCGTCTCTATGGTGGTGCACAGTATCATCGGGCCATGGCTGAATTTCGCTTTGTGGTTGGAGGGATCAAATGTC CCCCAATTACCCGGGAAGAAATTGTGAATGCTTGTGGAGTTGAAGACATTCACGATGGGACAAACTACTCTAGGTAATACTGTGTGTTTTACATATTCAT TCCTGTATTACTACTCACTATTGAACATTTATTTTGAGTAATCAGGACTGCTTGTGTAATTGCTGTTGCAAAGGCTCGTGACACATTTGAACCTTTTCTT CATCAGGTGATTAGTGCTGAAAAAATTAATAATTCCTTTTCATTTCATTTTTCTTTAATTCTGTCAATTTATTAGGAATTAGTCCAACTTGTACCATGTA ATGAGCCTACTTTAATAGTGTTACTTGAAGTCACCAATTACAGTTTATGTGGTCTAAAGAAGGATGGCAGAAAATAAGAATTGATAAGGAAAGTATTCAT AATTATTTTGATAAATTCCAACGACAAGACTGAAATCCCTTGTCTAATAACCAGTGAACCACAGCAACGACTTGGCTCACATCATACCAAAAGTTGTGTG GTTTAAGTATCTTGCATTTAATTTACAAAATGATCGGGATGTTCCTTAAAGAAAGATTGGTGGATGAAATAGAGAGTTTTTTATGCATCATTTGTCATTG CAATTTGCTATAAAACTCAAAGGAAAGTTCTATGGGATAGCTCTATGACAGGCAATGCTCTGTAAATGCTGTGTAATGCAGAACTGACAAGAGCAAAAAC AGAGTGTAAGAGAGATTAGAGTGCTACATAGAAGGAAAGATAGGATAAAAAACAAATATATCCGAAAGAAAGTTGGAGTAGCTCCTATTGGAGGAATTGA CAGAAGTTTGCCTAAGGTAGTTTTGTTTTGTTAGAGGAAGACTAGTCGTGGTACTAGTGAGAGAGATGGACCTAGAAGGGGTTAAATTGTAACTGGTTTT TATCCACAATGAATGGCTGAAAGAATATTGCATATTCTGTGCCATGCCGTAACTTCTAGGTTGTATTGAATTGTAACTTGTATACTACCATCTTTTCATG ATTCTACTTGGTACTTTTCCCTTAACAAACTTGCACTATCCTGGATTATGAGAATTCTCTGCAGTTTTATTGAAATTGTAGAACAAAGTCAGTTCAATTT CAATTGCCGGAGTATTTAAAACCTGGTAGTTTCTGATACATAGTGTGTTGTGCTCATATATTTGACACAATGGAAGGTTCATTTGCCATGATCCATGAAT AAGCATGATGCAATTTTGGTGAACATTAGTTGAAAAATTGCATTTGCTTGTGCAATTTTTTATAAAGAGAATCTGGTTTGTTATTTAGTAAGGTACATTT CTAGAAAAATTATCACTTTTTAACCTCTGATGTTTTTGTTTCCTAGCTGATTTATTAATTCTGTCATTGACACAGTTAGGGTCTAGATTGTTGCATATAC TAAAGAGATTGCTTCCAATCTCTGTTTATCTTCTTCAGAAAGATGATGAGTATCTAAGTGGGCATGAGGTTTTCCTTAGGCGTGTTGCCTCTGCCTTTAA CAACTTCGCAGAATCAACTGCAAAATCATGCCATGAAAAGTTAACCACCACTTCTCCCCAACTGCTATAAGTTTGTTGCTATATTTCTAACAAAAACATC CTTTTTTAACAAACAATACAAAACAATAAAACGATACATGATGTACTTCATTCTTAGTTTTCGGAAAATTGCACTAACCTCTCTAAGTGTGATGAGATTA CTATCAACACGTCATATATGTATTTGGAAATTATAGCTATTCCTCTTATGTGTAAATTTCACATGTACAGAAAGCTGTATGAAGGGTGCGCATGTGTATG CAAAATAAAAGTTTGAGGAGGGTATTTGGTGAAACCTCAAGGGAAAAAGCAATTTCATAGTCAAACCTGAAGAGGATTGTCATAATTTGGCCTTTTTAAA TAAAAATTGGGTTAATTTGCAATGTATTGTTGTGTAAAGCTAATAAAATGTAGCAGGAATGCTCATATTCATGTTTGAAAATGTTGAAAAATATGGTTTC ATCAATGTTTGAGCAAATATTTGTAAGAGGAGGGGTGGGAAAGAGCTTGTAAACTTGTTAAACAATTCCCCGTGCGCAGAAGTTTTGTAGAATCAAATTA AACAGATGAGGACTAAGATGCATTTTTAGATTTTAAAATAGAGCATGATGTAATATTCTGACAATGCATCATAATGTTGTGTTTTTCTCTTCATTAATTC ATGATTGTGCATTTTTTTCTGGCTATTAAGGTATGTTCCCTTGATTTTATGAAAATGAAGTCATACATTTCGTATTGAGTGCAACTTGCGATAATGTTAT CAAACTAAACTTGCCAATCATGAATGTTACATGTTTCATCTTCACATGCTCGTCCATAAATTATTCTTTTTCTTACTGTTTTCTAAACTCCACTTTTTCC ATGCTGCTTTGCTGCAGATGTGCAGAGGACTTGGTAAGCACCACAAGATATGTTTCATGGTCTCTCCATAATAAGAGTCGCGCTGGTTTACGTCAGTTCT TGGATTCATTTGGTGGAACAGAGAATTCCAATGTTGGTAATAATCCTACAGAAAATGTTCCGTCACAAACAAGTTCACATGAGAAGGAAGACACAAAGCC ACAACCAGATGTAAAGCTCAGCCACTTGGCCTCTGGCACGGATTCTAGCACATCCAATCAGACAACAGAAACAAAGCTTGCTGACCTTCTGGATAGCACA CTTTGGAATCGGAGGCTTGCACCTTCATCTGAAAGGATTGTTTATGGTTTGGTACAACAGATATTTCATGGCATAAGAGAATATTTCTTGGTTTCCACAG AATTAAAGTTTAACTGTTTCCTTCTGATGCCTATTGTGGACAAGTTGCCTGCACTTATTCGGGAAGACCTAGAGTCTGCTTTTGAGGATGATCTGGATAG TGTTTTTGACATAACCAATCTGCAGAATTCACTGGATCAGCAGAAGAGAGATACAGAAATTGAGCTGAAAAGGATCAAGAGGCTTAAGGAGAAATTCAAA ATGGTACATGAGAAGCTAATTCTACATCAAACCGCGTGAATACGTGATGTCAAGCCACCGCTGGAACTGTCGAGTATCAGAGTATCATTTTATTTCAATT GATGGAATGTGGTTTTAAAATTTGAGATTATTGATTTTTCATATCTCCCTCTTTTAGTCCTTATCTAGTGGTTTATCTTAGGAGGAGGGTGAATATTGAA TACATGTTCATTGTGATAACCATTTGCTGTAGTTAACCAAAAATCATGTTTATTCTGAATCTGTTCCTGTGCAAAATTAAAACACAATTATGTTTTTGAA CATTCTTCTTCATTGTGATTGTGGGTTGTTTTCTT
• Tissue: pods
• Gene name: LI_gene_162361;
• Additional information: details;

Expression of Ll_transcript_336658

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.3
• PS3: 0.7
• PW1: 0.5
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336658

• Blastp: Dynamin-like protein ARC5 from Arabidopsis with 80.17% of identity
• Blastx: Dynamin-like protein ARC5 from Arabidopsis with 76.88% of identity
• Eggnog: Dynamin family(COG0699)
• Kegg: Link to kegg annotations (AT3G19720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429278.1)
• Pfam: Dynamin family (PF00350.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;