Ll_transcript_336648

• Id Trinity: TRINITY_DN48591_c3_g1_i4
• Name Transcript: Ll_transcript_336648
• Sequence: GTTTATATTAAGCATTGGAGTTTTGTTATCTGAAAAGAATTGAGGTGTGGGTATGGAGTTAGGATCATCAGAAGAAGATGCAAGAGAAGAACAGCAATGT CTCTACGAAGCTTACAACGAACTTCACTCTCTTGCTCAAGATCTCCACACTCCCTTCGACGCCCCCGCCGTCCTTGTCGTCGGCCACCAGACCGACGGCA AGAGCGCCTTAGTTGAAGCCCTCATGGGTTTTCAGTTCAACCATGTCGGCGGCGGAACCAAAACTCGCCGCCCCATCACCCTCCACATGAAGTATGAACC TCAATGTGATTCTCCTCACTGTTATCTTCTCTCTGATCTTGACCCTACTTTGTATCATCATAAGTCTCTCCCTCAAATTCAGGCATATATTGAAGCTGAA AATGTGAGGTTGGAGCATGATTCTTCCCAGTTCTCAGCTAAGGAAATAATTATTAAAGTGGAATACAAGTATTGCCCAAATCTTACAATCATAGACACTC CTGGGCTTATTGCTCCTGCTCCAGGTCGAAAAAACAGGGCATTGCAGGCCCAGGCACGTGCAGTGGAGTCTCTTGTGCGAGCAAAAATGCAACACAAGGA GTTTATTATATTGTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGACGCATTGTAATGCAAATTGATCCTGAGTTGTCAAGGACTGTAATT GTCTCAACCAAGCTCGATACCAGGATACCTCAATTTGCACGTCCTTCCGATGTTGAAGTTTTCCTTTCACCTCCTGCATGTACACTTGATAGCTGCATTT TGGGCGACTCTCCCTTTTTCACGTCTGTGCCATCAGGAAGAGTTGGTTCTGGAAGTGATTCTCTCTACAGGTCCAATGATGAGTTCAAACAGGCTGTATG CTTCAGAGAGATAGATGACGTTGCTGCTTTGGAAGAAAAGTTGGGCAGACCATTGTCTAAGCAAGAAAGGAGCAGGATAGGTGTGAGCAAACTTAGGTTT TTTTTGGAAGAACTGCTACAAAAGAGGTATATAAGGAGTGTACCACTGATCATTCCACTTCTTGAGAAACAGTACCGGGGTGCGACAAGAAAGTTGAGTG ATATAAATCAAGAATTGAGCACACTAGATGAATCCAAACTGAAGGAGAAAGGAAGAGCCTTCCATGATCTGTTCTTGACCAAGTTGTCATTGCTGCTTAA AGGGACAGTTGTCGCACCTCCTGATAAGTTTGGTGAAACACTACAAGATGAACGAATAAATGGAGGTGCATTTGTTGGTGCTGATGGTGTTCAGTTCCCT CCCAAGCTAATACCTAATGCAGGAATGCGTCTCTATGGTGGTGCACAGTATCATCGGGCCATGGCTGAATTTCGCTTTGTGGTTGGAGGGATCAAATGTC CCCCAATTACCCGGGAAGAAATTGTGAATGCTTGTGGAGTTGAAGACATTCACGATGGGACAAACTACTCTAGGACTGCTTGTGTAATTGCTGTTGCAAA GGCTCGTGACACATTTGAACCTTTTCTTCATCAGTTAGGGTCTAGATTGTTGCATATACTAAAGAGATTGCTTCCAATCTCTGTTTATCTTCTTCAGAAA GATGATGAGTATCTAAGTGGGCATGAGGTTTTCCTTAGGCGTGTTGCCTCTGCCTTTAACAACTTCGCAGAATCAACTGCAAAATCATGCCATGAAAAAT GTGCAGAGGACTTGGTAAGCACCACAAGATATGTTTCATGGTCTCTCCATAATAAGAGTCGCGCTGGTTTACGTCAGTTCTTGGATTCATTTGGTGGAAC AGAGAATTCCAATGTTGGTAATAATCCTACAGAAAATGTTCCGTCACAAACAAGTTCACATGAGAAGGAAGACACAAAGCCACAACCAGATGTAAAGCTC AGCCACTTGGCCTCTGGCACGGATTCTAGCACATCCAATCAGACAACAGAAACAAAGCTTGCTGACCTTCTGGATAGCACACTTTGGAATCGGAGGCTTG CACCTTCATCTGAAAGGATTGTTTATGGTTTGGTACAACAGATATTTCATGGCATAAGAGAATATTTCTTGGTTTCCACAGAATTAAAGTTTAACTGTTT CCTTCTGATGCCTATTGTGGACAAGTTGCCTGCACTTATTCGGGAAGACCTAGAGTCTGCTTTTGAGGATGATCTGGATAGTGTTTTTGACATAACCAAT CTGCAGAATTCACTGGATCAGCAGAAGAGAGATACAGAAATTGAGCTGAAAAGGATCAAGAGGCTTAAGGAGAAATTCAAAATGGTACATGAGAAGCTAA TTCTACATCAAACCGCGTGAATACGTGATGTCAAGCCACCGCTGGAACTGTCGAGTATCAGAGTATCATTTTATTTCAATTGATGGAATGTGGTTTTAAA ATTTGAGATTATTGATTTTTCATATCTCCCTCTTTTAGTCCTTATCTAGTGGTTTATCTTAGGAGGAGGGTGAATATTGAATACATGTTCATTGTGATAA CCATTTGCTGTAGTTAACCAAAAATCATGTTTATTCTGAATCTGTTCCTGTGCAAAATTAAAACACAATTATGTTTTTGAACATTCTTCTTCATTGTGAT TGTGGGTTGTTTTCTT
• Tissue: pods
• Gene name: LI_gene_162361;
• Additional information: details;

Expression of Ll_transcript_336648

FPKM

• PAB: 5.4
• PNAB: 36.5
• PS1: 45
• PS2: 28.4
• PS3: 44.4
• PW1: 45.8
• PW2: 56.7
• PW3: 35.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336648

• Blastp: Dynamin-like protein ARC5 from Arabidopsis with 78.97% of identity
• Blastx: Dynamin-like protein ARC5 from Arabidopsis with 78.4% of identity
• Eggnog: Dynamin family(COG0699)
• Kegg: Link to kegg annotations (AT3G19720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429278.1)
• Pfam: Dynamin family (PF00350.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;