Id Trinity | TRINITY_DN48591_c4_g1_i11 |
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Name Transcript | Ll_transcript_336679 |
Sequence | GTTAAAATGGGGTAGCATGTCACAACCTCAGGTCAATTTATTTTCAGCAGTTTATACTTTATAAGCACTTGGACCTACAAAACATAAGTTAGGCAGCCTA CTCTTATGTCATTATACTCATCATGATAAAAAAAGTGCTTATTTTCAAAAAGTTACTTCTAATCTTCCTTTTCTTCTTATCATCATCATCATTATCTTCC TTGATTTTTCTTCTCAGTCATTATTTATATCATTCAACTGAAAGATTTGTAGAGTTGAGTTCACAAAAGCAAGAGTTAAAAGTGAACCTCTGAGTGAAAA AGTTTGCAGAACTTGTTCAATCCAACGTGTGAAGATGGCAGCTATATCTTTCTTCAGAAACATTCATGAATACCAGAAATGGAAGAAGTGATTTATTCGT AGAAGTTAGAATGTTATATACTATTCCACATAATTTCTGTGAGAGTTCCTCATCTTTTCTTTATATTATTACTAGCTTTGTTTCAGTTCAGGAAAAAGCT TCTACTATTTCACAATTTATGCTGCAAAAAAATATTGTACTCTTATTACAGATTCTGCAGGTTTAGATTAATAGAAATCCTGATATAATAATTCATAAAG AAAAGTTTAAAGCACCCCTTTAGTCCCTCAATTTAAAAAAATGTGAAAGAAGGATCTAAACTATGGTTTAAGTCCTAAATGGTTCTTTGCCATGTAAAAT GTAAAAAGTTTCTGAGTTTTTTGAATAGTCAATGATTATTTCGTAGCCGAACCAAAGTTTAGGAACTAAATCGCACATTTTAGTTGAATTTTTCGTAATA CATATATAGCTTTTCATTAATGTTAAATTTACCATGTCTTCAGATTCTTAGAATTTCAACATCTGTTTATAGCATCAAATGAGGAAGTTCCTGGTTATAG CATTTTCCATAACCATATGCTTCATTGCTTTTGTGGTATCAAAGATTATTATCTCAGTTCTACTCTACAAAAGATGGAGAAAAAAACGTGTGATTTATGA AGAAGGTTATCCAGAAGGGAAAATGGTAATATTTAGAACTTCAGTGTTGCAATCTCTTACAGCTGAAGTGGTCTTAAAGAAGACACAGAAACTGAGCAAC AAAGATATCATTGGTTCTGGTGGTTATGGTGTAGTTTATGAACTAAAACTAGATGAGTCCATAGCCTTTGCTGTGAAAAGGTTGAACAGAGGAACTGCAG AGAGAGATAAAGGTTTTGAGAGAGAGTTAGAAGCAATGGCAGATATAAAACACAGGAATATTGTGACCCTTCATGGATATTATACTGCACCACACTACAA TCTTCTCATATATGAGCTAATGCCTAATGGAAGTTTGGACTCTTTTTTGCATGGGAGATCAAGGGAAAAGAAGCTTTTGGATTGGCCAACAAGATACAAA ATAGCTGTAGGTGCTGCTAGAGGAATAGCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAGTCAAGTAATATATTGCTGGATG AAAATATGGAGGCTAGAGTTTCTGATTTTGGATTAGCCACACTAATGGAACCAAATAAAACTCATGTTTCAACAATTGTGGCTGGAACTTTTGGATACTT AGCACCTGGTATGGATAAAACTGGCTTGAAAGTTAACACAATTTCTCTCCTTCACACCACTTGTGTTACTAACTCATTAGTGCTTTCATGTAGAATATTT TGATACAGGGAGAGCAACATTTAAAGGGGATGTTTATAGTTTTGGAGTTGTGTTACTAGAGCTTTTAACAGGGAAAAGGCCTAGTGATGAAGCATTTATG GAAGAAGGAACCAAGCTTGTAACATGGGTAAGACTAGAACCAAGTTTGAAATATATAAGATATCTAGTTTCTTTGATGAAGTTAAGTATCATATTTACTT TGAATTCAGAATTTGAGAATTGCTTTCATAAAGGTATGGTTGAAGCCAGAAATATCAATTGTATTTAAATATAAAAACAATAAACTATATGGAGGATAAA ATCACCAAAAGTAGAAAAATAAATGAAGCATCAACATCATACAATTTGAGTTAATTTATCCTGCACTTGAAGGCATAAATTATAATGAACTAGATAGCCA TGCAATACTTATTACTTGCTTCAAGTCTTTTAGTCATTACAACCATAATAGTTAAAAATATAACAAGATTTGGAGCTCAAATCTCAATTACTTAAATCTA GACACATGTTTGAATTGAAGATTTACTTTGTAGAAAATATTTATGTTGTTTTTGGATCAGGTGAAGGCTGTGGTTGGAGAGAAGAAGGAAGAGTTAGTTT TGGATAATAGGTTAGGGTCTTGTCCAATGCAAGAGATCAACAAGGTGTTCAACATTGCAATGATGTGCCTTGAATCAGATCCCTTGAATAGGCCAACTAT GGCAGAGATTGTCAACATGCTACTAGGCCAAACAGAACCACAGAAACTTGCCAAAGCACCCTGAATCAGAAATGGCATAGCATGCATGCATAGCTGAGAA TACAATATTGACTTTTGTGCTTGAAAAAAAAAATTAAGGGTCTTGAGATGCAAGATGTGATGTTGTTCACCTGTCTCATTTTTTGTACCGTTGTGTCCCA AGCCAATCAAAAACTGCCAAATAATTAAGAAAAAATGATATAAACAGAAAATAAATTTTTTATTTTACTTGCGGGAGTGTGATTGACTTGGAAAATGGAT AGGGTAATGTTTTGGGGCATGTGATCCTCCTCACTAGCCTTTAGTAATTATACAAAGATGTTAACATGCAACATATAGAGGTAGGTTTGGTTAGTGAAGC ACATGTATGAAGTGATACTAATGAGAAGTGTTTGTTTCTAAGAGAAGTAGTACATCATAATTTGTCAACTTTGCAAGAAAAAGTGTATACTTAAGGCCAA CTCAAAATAATTTAGAACACCAGGAAATTATAAGTAGTTTAACTAAGGATACATATCTACTGTCCCACAAGTTGTACCACTGCATGTGCCATCAACTGTA ATTGGTTAGAAACCTGCCCAGTGTGGTACAAAAGATGTGGTCCCTGAAGTAACTATCTTTTTAATCAATTTATTTTGCAGAGGAAATGGAGCAAGTGTTG CAAGGATTATTCCCTATGCAGCTATTCATTATATGTCTTATGAGGAATACCGAAGATGGATCATTCAAACTTTCCCGAATGTCTCTAAAGGGCCTACCCT TGACCTTGTTGCAGGATCATTCTCTGGAGGAACTGCTGTACTTTTTACTTATCCCCTTGACTTAATTCGAACTAAGTTAGCTTATCAGATTGTTAGTCCA ACAAAGTTGAATGCTTCAGGGATGGTTCACAATGAACAAGTTTACAAGGGGATTCTTGATTGTTTTGGAAAAACTTACAAAGAGGGTGGCTTTAGAAGTC TATACAGAGGAGTGGCTCCTACACTCGTTGGAATATTTCCGTATGCTGGTTTGAAATTCTACTTCTATGAGGAAATGAAGCTCCATGTCCCAGAGGAGTA CAAGAAGAGCATCATGGTGAAACTCACATGTGGATCTGTAGCAGGTTTATTGGGTCAGACTTTCACGTATCCTCTTGAAGTTGTAAGGAGGCAAATGCAG GTAACTTGTTTCTTTTGTTTATTCAGATTTTTATAGATGTATAAATCAAATAATATGGTACAAGTTGACAACAATCTGGTTAGGTTCAAAAACTCATGGG ATCTGATAATCTAGAATTGAGGGGGACTGTGAAATCACTCGTTCTGATTGCTCAAAAGCAAGGCTGGAAGCAACTCTTCTCAGGGCTGAGCATCAATTAC ATTAAGGTTGTTCCATCTGTGGCCATTGGGTTTACCGTTTACGATACTATGAAATCATACCTGAGAGTTCCATCGAGGGACGAGGAAGCTGCAGATGAAG CAGTAACCAATAAAAGAATCCGCCAATAATCCGCAGCGTAACAATATAACATGTTCCCCTTCAGATACAAGCCCTTCTAACTCCTCATATGCTTCAAATT GGCATCTGGGTCTCATTCTATCTGCACTGTTATTCACACATTATTAGAGCTTCACGTTTCATTCTTTCAAGTTGTACCATGTGAGATGGAGGTCATAAAA TTCCATCTTTAAATCTGGGAATGACCCTTGACTCAGCTATCATTGATTTCATCAATTTAGGTTATGACAAAATGTAAGTTGTCAATATAGGACACACTTT GCACATAGAAATAAAAGATAAACTGCATTTTTTGAAGGTGCGGGTAGATATGATGATTTTGAAATTTGATGTAATCCCTCAACTGGACACGGCTGATTCT AAGCAGCCATCAGATTTGTACCACCTTCCAATATTTGTTAGCTATTTTTGTTCTATGTTTGGTATGTAACAACATCTTAATGTCAATAAGATATCCACAC AATCAATTTCGATAGGAAATGGGTTTATATGTACTTCATAAAGAATCAACATCATAACATGCTGGTGTTTGTGTGCAAAGGAGGGAAGGCAAATGTAGTG AGTGTGTTATATGTAAATTTCCATAGGAAATGGGTTATATGTACTTCATAAATATTATGCAGCATAATGGAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_162362; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_336679
Blastp | Receptor-like serine/threonine-protein kinase At1g78530 from Arabidopsis with 73.77% of identity |
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Blastx | Receptor-like serine/threonine-protein kinase At1g78530 from Arabidopsis with 73.47% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G78530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443826.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |