Id Trinity | TRINITY_DN48591_c4_g1_i15 |
---|---|
Name Transcript | Ll_transcript_336686 |
Sequence | GTCAATTGATCATTGAACTAAGTATGTATCTGATAGATTTTAACATTAGATTATAAGACTTCTTTGTAAAATCATCAACATTTGCAATGAAAATAGGCAT TAGATATACTTGATGCATCATAGCTTTTGTTATTAACATTAGACATACTTGATGCATTATAGTTTTTGATATTGACTGTTTTTCTTCATTTTTTGCTCTT TCTTAGAAAAACTAAATTGTTTATGGACATGATTTATAATACGAGATTATGACATCATTTTATTCAAGTGACCAATGTTACCAATTGTACATTTGTACCT AGTGGGAAAAAGCTTTGTTTTTGTTATTGTTGTAAGTATAACTAGTAAAAAGTTTAAGACTCATGAAAAGTTGAACTATTTTTTAGTGCATTATCATTCT AGAGGGTGCGCCGTGTCCTCGGTACAAGAGTGCCTTGTGGTTTGGAGGTTATGACTTCAAACACTGAAAATAGACTCTCTCCTCACTAGAATAAGGTTGC ATGTATATACACTGCTCAGACCCACTAAGTAAAAGCCTCGTGCAAAAACATCTGATCCGTTGATATAAATGGAAATGTGTTCTTTATGTTCAAGATTCAT TATTGTATTTAGTCAATTGATCATTGAACTAAGTTTTGTAATTGCAATGTTGAATTTGATGCAGGGAGATCAAGGGAAAAGAAGCTTTTGGATTGGCCAA CAAGATACAAAATAGCTGTAGGTGCTGCTAGAGGAATAGCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAGTCAAGTAATAT ATTGCTGGATGAAAATATGGAGGCTAGAGTTTCTGATTTTGGATTAGCCACACTAATGGAACCAAATAAAACTCATGTTTCAACAATTGTGGCTGGAACT TTTGGATACTTAGCACCTGGTATGGATAAAACTGGCTTGAAAGTTAACACAATTTCTCTCCTTCACACCACTTGTGTTACTAACTCATTAGTGCTTTCAT GTAGAATATTTTGATACAGGGAGAGCAACATTTAAAGGGGATGTTTATAGTTTTGGAGTTGTGTTACTAGAGCTTTTAACAGGGAAAAGGCCTAGTGATG AAGCATTTATGGAAGAAGGAACCAAGCTTGTAACATGGGTAAGACTAGAACCAAGTTTGAAATATATAAGATATCTAGTTTCTTTGATGAAGTTAAGTAT CATATTTACTTTGAATTCAGAATTTGAGAATTGCTTTCATAAAGGTATGGTTGAAGCCAGAAATATCAATTGTATTTAAATATAAAAACAATAAACTATA TGGAGGATAAAATCACCAAAAGTAGAAAAATAAATGAAGCATCAACATCATACAATTTGAGTTAATTTATCCTGCACTTGAAGGCATAAATTATAATGAA CTAGATAGCCATGCAATACTTATTACTTGCTTCAAGTCTTTTAGTCATTACAACCATAATAGTTAAAAATATAACAAGATTTGGAGCTCAAATCTCAATT ACTTAAATCTAGACACATGTTTGAATTGAAGATTTACTTTGTAGAAAATATTTATGTTGTTTTTGGATCAGGTGAAGGCTGTGGTTGGAGAGAAGAAGGA AGAGTTAGTTTTGGATAATAGGTTAGGGTCTTGTCCAATGCAAGAGATCAACAAGGTGTTCAACATTGCAATGATGTGCCTTGAATCAGATCCCTTGAAT AGGCCAACTATGGCAGAGATTGTCAACATGCTACTAGGCCAAACAGAACCACAGAAACTTGCCAAAGCACCCTGAATCAGAAATGGCATAGCATGCATGC ATAGCTGAGAATACAATATTGACTTTTGTGCTTGAAAAAAAAAATTAAGGGTCTTGAGATGCAAGATGTGATGTTGTTCACCTGTCTCATTTTTTGTACC GTTGTGTCCCAAGCCAATCAAAAACTGCCAAATAATTAAGAAAAAATGATATAAACAGAAAATAAATTTTTTATTTTACTTGCGGGAGTGTGATTGACTT GGAAAATGGATAGGGTAATGTTTTGGGGCATGTGATCCTCCTCACTAGCCTTTAGTAATTATACAAAGATGTTAACATGCAACATATAGAGGTAGGTTTG GTTAGTGAAGCACATGTATGAAGTGATACTAATGAAGAAGTGTTTGTTTCTAAGAGAAGTAGTACATCATAATTTGTCAACTTTGCAAGAAAAAGTGTAT ACTTAAGGCCAACTCAAAATAATTTAGAACACCAGGAAATTATAAGTAGTTTAACTAAGGATACATATCTACTGTCCCACAAGTTGTACCACTGCATGTG CCATCAACTGTAATTGGTTAGAAACCTGCCCAGTGTGGTACAAAAGATGTGGTCCCTGAAGTAACTATCTTTTTAATCAATTTATTTTGCAGAGGAAATG GAGCAAGTGTTGCAAGGATTATTCCCTATGCAGCTATTCATTATATGTCTTATGAGGAATACCGAAGATGGATCATTCAAACTTTCCCGAATGTCTCTAA AGGGCCTACCCTTGACCTTGTTGCAGGATCATTCTCTGGAGGAACTGCTGTACTTTTTACTTATCCCCTTGACTTAATTCGAACTAAGTTAGCTTATCAG ATTGTTAGTCCAACAAAGTTGAATGCTTCAGGGATGGTTCACAATGAACAAGTTTACAAGGGGATTCTTGATTGTTTTGGAAAAACTTACAAAGAGGGTG GCTTTAGAAGTCTATACAGAGGAGTGGCTCCTACACTCGTTGGAATATTTCCGTATGCTGGTTTGAAATTCTACTTCTATGAGGAAATGAAGCTCCATGT CCCAGAGGAGTACAAGAAGAGCATCATGGTGAAACTCACATGTGGATCTGTAGCAGGTTTATTGGGTCAGACTTTCACGTATCCTCTTGAAGTTGTAAGG AGGCAAATGCAGGTTCAAAAACTCATGGGATCTGATAATCTAGAATTGAGGGGGACTGTGAAATCACTCGTTCTGATTGCTCAAAAGCAAGGCTGGAAGC AACTCTTCTCAGGGCTGAGCATCAATTACATTAAGGTTGTTCCATCTGTGGCCATTGGGTTTACCGTTTACGATACTATGAAATCATACCTGAGAGTTCC ATCGAGGGACGAGGAAGCTGCAGATGAAGCAGTAACCAATAAAAGAATCCGCCAATAATCCGCAGCGTAACAATATAACATGTTCCCCTTCAGATACAAG CCCTTCTAACTCCTCATATGCTTCAAATTGGCATCTGGGTCTCATTCTATCTGCACTGTTATTCACACATTATTAGAGCTTCACGTTTCATTCTTTCAAG TTGTACCATGTGAGATGGAGGTCATAAAATTCCATCTTTAAATCTGGGAATGACCCTTGACTCAGCTATCATTGATTTCATCAATTTAGGTTATGACAAA ATGTAAGTTGTCAATATAGGACACACTTTGCACATAGAAATAAAAGATAAACTGCATTTTTTGAAGGTGCGGGTAGATATGATGATTTTGAAATTTGATG TAATCCCTCAACTGGACACGGCTGATTCTAAGCAGCCATCAGATTTGTACCACCTTCCAATATTTGTTAGCTATTTTTGTTCTATGTTTGGTATGTAACA ACATCTTAATGTCAATAAGATATCCACACAATCAATTTCGATAGGAAATGGGTTTATATGTACTTCATAAAGAATCAACATCATAACATGCTGGTGTTTG TGTGCAAAGGAGGGAAGGCAAATGTAGTGAGTGTGTTATATGTAAATTTCCATAGGAAATGGGTTATATGTACTTCATAAATATTATGCAGCATAATGGA AAT BLAST |
Tissue | pods |
Gene name | LI_gene_162362; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_336686
Blastp | Mitochondrial carrier protein CoAc2 from Arabidopsis with 67.23% of identity |
---|---|
Blastx | Mitochondrial carrier protein CoAc2 from Arabidopsis with 68.63% of identity |
Eggnog | Solute carrier family 25(ENOG410ZRF1) |
Kegg | Link to kegg annotations (AT4G26180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436200.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |