Id Trinity | TRINITY_DN48592_c1_g4_i1 |
---|---|
Name Transcript | Ll_transcript_338216 |
Sequence | ATTTGACAAGCAAGTAATGATTTTGTTTTGTCTGTAACATAGAAGCCAAAAACCGCTATCTATTCTTCTTTGAGGTTGTTATTCCTTTACACTGACCAAC ACAAACAAATTTCTCTCTTGTTTTTTTCTTCTTTCTTACTCATTGGCCTTAAATACCATCACTCACTTTATATAAAAACACCACTCATAGTTATCATTAA TGCTTTATCAGTTTATCTCATTCACTCTCATTTGGATTGTGTTCAGATTTTGTATTGGAATTAGTGATTACTTCAGCATAACATTTAACAAAGTGTCGTC GTAGCATGGCAGAAACCAGTACATTTTCTGCAATAACTCGAACTCAAAGTGATGTAGCAGCCATGAAGGATATGCTTAATGCCCAACAACAACTTCTGCA AAAGTTGTGCATCGAATTGGATAAAGAAAGAGAAGCCTCGGCCTCTGCAACAAGTGAAGCATTGGACATGATTATGCGTCTGCAAGGAGAGAAGGCTGCC GTAAAGATGGAAGCGAGTCACTATAAAAGAATGGCAGAAGAGAAGATAGGACACGTCGAGGCCACCCTCGAATTCTTTGAAGAGCTTATGTATAAGAAGG AAATGGAAATTGCGTCGCTCGAGTTTCAAATCCAGGCTTATAAACACAAACTTCTTAGCTTGGGGTGTGATCTCAATGCCAGCGAGTTCGAATTTTCAGA TGATCTATTGTTGAATGGAAGTGATCAACAAAATGGAGAAAATGGTTCTGTAAGAAGGCAACATTCATTGCCTCCTCTTCCATTTAAGAATTCCTTACTA GCTGCAAGAAATGAAGAAAGATCAACTAGTCCAGTTTCGAATACAGTTTCAGATGTAATTTCTAGGATAGTCGACGAGTGCATGTACAAGGAAGTTAGCC CTAGTCCAACAAGCTTGGATTTGACACAAAAGTCAGTCGAATTTGCATATGGAACCCATGATTCATACTTGGAACAGATAAAAAAGTTAGACGAAAAAGT AAAAGTGATTTCGGATTGTACTGAAGAAGAAAAGAGTGCAAGCTTGTGTGATAGAAGAGGGAGGTCTTGTTCAATATTTTCCCAAGCAAAAACTAAGATA CCCTGTACTAATTCGGATAAAGTAATTGATGGTGAAGGTATACAAGATAGAAAAGAAACTATTGAGCCTCCTTCCTCGCCTAATGTCCATGATGTGTTCG AAGTCTCGGACGCTAGTGAAAAGCATAAACTCGGCAAACATGGGAGAGAAAGGCTTGGAAAATTGTATTCTGAAGCAGAGAACAGATTAACAAAACCAGA CTCAGTGCCTGAAAGAATGGCTGCAGCACATGTTAAACACGATGCTGAAACGCGAAAGGGTATGCTTAGAGTACATAGTGAAATCAAAATGCCTAGTCCT AGTGATATCATGACTATCACTGGCCAGAAAAAACATGGGATGCGTGTGGAATCCGATGCTCAAGCCGAGTTTCAAAAGCTGCATCGGAGAATTGAGCAAC TGGAAAGGGAGAGAATTAGAAGGCGAGAGATTATTCATGAAGGAGATGGCCAAGTGCAGTTAAGGCTATTGAGGGACATACAAAGTCAACTCACTTTAAT ACAATCAGATACGAGGATCTGGAAAACCAGAAAATCTACTCCTATGGATGATGTGCCTTTGGGTTCTCTCCAAGAGGCAATGTTGCACTTTTGGCTTTGA TCAAGTAACTACTGAATGGTCATCTCAGATAACCTATCGACCCATTGCATGATATGATGTATATATCTTTTGTCTAAAAGAGATTTTTTTGGAGGCAGGA AGGTAGAAAAAATCTTCTAATTTGAATTTAGTGACTAAAAAATTTATACCTTCCCATTTTATGTTGTACATGAGGCACTACAATAATGAAGGTGATTTGA AATTCTTGTAGGTTTAAAGTATAGTTTCATGTGCCTATGATTGAGTTATTATACACATGGCCTAGTAAATTGAAGAGCTTTCTGCCTTACAAAATGACTA CTGTTTAGTGTGTTGTTTCACCCTCATTGAGCTGAAAAATTAGTGTTCTAATTGCTTTATTTTTTTGTATATGCGACAGTTTGAGATTTCTCAGTATAGT TTCTGTATTCCTTTTACTAATTCTTAGCAACAGAATAGCTATAAACTGACCTTTGATTATGCTGTGTAGTGTGGTTTGGTGAAGATAGATTGACATGATA TATATGAGAAAAAGATTTATACAATTTTTTATAGTGTCACTGTATTATTTACCATTCATATTATATTTCATTGATTTTTGACAGTAATAGATATTACACT TAAGTTTTTGAGTGAATGACTTTTACATGGGTGGAATTTTATGCAGAT BLAST |
Tissue | pods |
Gene name | LI_gene_162384; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338216
Blastp | Myosin-binding protein 7 from Arabidopsis with 42.48% of identity |
---|---|
Blastx | Myosin-binding protein 7 from Arabidopsis with 42.48% of identity |
Eggnog | DUF593 domain containing protein, expressed(ENOG410Y9EY) |
Kegg | Link to kegg annotations (AT5G06560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414373.1) |
Pfam | Zein-binding (PF04576.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |