| Id Trinity | TRINITY_DN48593_c1_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_337785 |
| Sequence | GTTTATGTGAATTCGGAGTAGATTATGAATATGAATTATATATTTGAATGTATACCTATTTGAAATTTTTTTGTTATAGGTTTACATATATATAAATATA AGCAGATATGTTACTGAACCACCGGTTGAACCACTAAACCACTATACCAATGTGACAATTGGTACAGTTTTAACAACATTGGCTGAATCTACACTTCTAC AAGCTGCTGCACGAGAAATTGAAGAAAGGTTGGAGTCACGCTTGATTGAATTGATGTGTTCTTGGCATAAACCCATGACTGAATTTGTCAAGAATTCTGT AGATGAGATCATGCGACAAAATTCAACACCAACAGGTTCTTCTCTGCCAAGCAAATCAGGAATTGGGGGCAAGGATTTCACTCATCACTCAGTTGATCAT GTTTCTTCTTATGAGTGTCACACAAGATTGTCAAGAATTGAATTTCTCCGATTTGATGGCACGAATGTTAAGGAGTGGTTATATCAGTGTGAAACTTATT TCATGGTGGATAATACTCCACAAGAGTTCAAGGTCAAATTGGCCATTATGCATTTTGAGGGTAAGGCCCTAAAATGGCATCATGCTTATGTAAGGTCAAT GTGGGTCAATTCTTTACCTACTTGGAGTGAGTATGTGAAGACCTTGTTGGAAAGGTTTGGTGAGGTGTTTGATGATCCCATGGCTGAATTGATGAAGCTG AGGCAAAAAGGAACCATTGCTAAGTACCATGAGGAATTTGATGTTGTTATTACTCGGTTGGATATCTCTGAAGATTACATATTAAGCTGCTTTTTAGGGG GGTTGAAAACTGATGTTCAAATGATAGTTAGGATATTCCAGCCTCAAACAATTAGAAAAGCATTCACCTTGGCCAAATTATATGAAGCTGCTAGCCCGAG CATCCATCTTAATGGTAAGGTCAAGAACACCAACATTTGTAGCTTGGGAGGAAAATCAATGCTCAACCATAAACCCTTACTTGCTTCTGCACCAGAGGTT CTCAAAGAGAAGCCAAGATTCAGTAGGAGCTTAACACCAGCCTTTATGAATGAAAGAAGGGCTAAAGGGTTATGTTACTTTTGTGAGGAGCCTTATAGTG CTGAGCACAGTTTAACTCATAAAAAGTTGCAAATTCATGTGTTAGAAGTGGATGAATTGGAGGATTGTGTGGTAGAAGCTGAGGCAGTGCAAGAATTGAG GGTAGATGCTAATGAAGAACCCCATATTTCTGTGAATTGAGGGTAGATGCTAATGACAGTGTAAGAAAAATCAGTACATACATTCTTTTTTTCTGTTTTC TTAGATGATTTCTTTCTTCTGTTATTGAAATTATTACTTTTACGTCTTTTGGTTTTACTATTATTTTTCAATTTCATTCACTGTTTTCTTTGCTAGGTAT GCATTTTCAACGAGACTAGAATAATCATTAGCCAATAGCAATTGCCAAGGGTGGCGATTTTTTGTTGTTGAAGATGAATGCAATCTGTCAAGATATAATG TGCTGATATTTTTGACCTTCTAAGTACAGAAACATCTATACAGACTCCTATGCAGTAATTTGTAGCTATTATGAACTTTTGCTTTGATCATTGCTTGGCT GAACAGAGATTCTTCAATAATGTTGTATACTATTCAACCCTCAATAATGTCTTTTTAACTTACATGACTGATAAGACACCAGCTAAATGATGTATCATCT AAGAGAATATTCCCCAATTGTTGTGTGTGTCTAAGATTCTCTCCTGCTAAACATTCAACTTAAAACTAGTGCATCTGTTCACCCCATTGCCTTTATTACT ATATAACATTGTAGAGAGTTGGAGTGGTTCTGGGAAGATGAAGAACAAAAAATTAAGAGTGGTAGGTTGATCAGGTAGTTCGGATGCTAGGTAAACCTGA TCATAAAGTCTACTTTCCAAATAAACATAACAGTTATTTATCATCATTAGCAATAAAAATAGCTGTAAGTATTTTTTTTAGTTTTTACTCTTGTTTCTGT TTGCTGCTTTTTCTTCTCCTCTTCTTGTTTAACTTTTATTTTTCAAGGCCTTACTGTTCTGATTCTTCAAGAGGTAATATAAAGAAGACAAATCTTTTGT GGAATACTTTTGAAAGTGAAACTGGAAATCTCATGGATTGCAGTTTAAGCATTCGGATATGATGTTTACCTTAAAATAATAGTCTAGCACTATAGCTTCT AATTCTAAGCAATCCAACATATGTTTTTAGTTTTCAACATAAAAATATATGTATGATGACTATGATCATTAAAATCTTTAACCAAGTTATTATCCAAGTA GGTAAAAATCTGAGGCAGATGTCAAATTCTGAAAATCCGTTGAACATTTTGTGGCATGAGAGTTCAATTCATAAACTTGACAGGCAGGAAATACTTCAGC AGAAAGGTTGTGTCATTTGGTTAACTGGTCTCAGTGGTTCAGGAAAAAGCACTCTGGCATGTGCCGTGAGTCAGAGTTTGCACTCAAGAGGAAAACTGAC TTATATCCTTGATGGTGACAATATCCGGCATGGTCTAAACCGCGATCTTAGTTTTAGCAAAGAAGATCGTTCAGAGAACATTAGAAGGATTGGTGAGGTA GCTAAACTCTTGGCAGATGCTGGGGTTATTTGCATCGCTAGTTCAATATCACCCTACCGAAAAGATAGAGATGCCTGCCGAGCACTACTGCCAAAAGGAG ATTTTATTGAGGTACATTCTTATTGTGGTGGACTGAATTATGCAGGTAGTTTGGCATCTGCTGAGTACTAGAAATAGGAAGCACTTCGATTATTGAACAA GGCAAGAGATTCTTCATTGCCAGTGCATTTCTTACAACCCTCAACCCACCAATGTTGTAGGTTTTCATAGACGTTCCGCTATATGTATGTGAAGCAAGGG ATCCAAAAGGACTCTACAAGCTTGCTCGAGCTGGAAAGGTCAAAGGTTTCACAGGGGTAGATGATCCATATGAACCACCATGCAGCTGTGAGATAGTATT ACAGCAAAAAGGAACTGACAGTATGTCTCCCAGTGATACTGCAGAAATACTGATATCCTACTTGGAGAAGAATGGATACCTGCGGGCCTGACTTCGCTTA AGCGGGGTCTTGCTCACTCCTCTGTTGTAGATATGTTCTGTTTAACATAGTCCGAGGTGCATAAAGATTGCTCCTTCGAGCCGCAAAGAAATCATCCGTT ACGGAGCACTTGCTTCCATCTTGTTCCCATTTTTCAGATACTATTAAGTGATCCTATAGATGGTCCTTTAAAGCCATTGAATGTTAGATGATTTTCATAT ACTATTAGGTGATCATGTAAATAACTCTCTAAAGCCATAAATGTTGCATGACTTAAACATCAAGCAACTTTCTTTCTACTCTATGTAAATCCACATATTT ACTTTAGAAGAAAAACAAACCTGTGTATGCAAACAATTTATTTCTTGACTTGTGCTTACTCAACAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162389; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337785
| Blastp | - |
|---|---|
| Blastx | Adenylyl-sulfate kinase, chloroplastic from Catharanthus with 73.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451923.1) |
| Pfam | Retrotransposon gag protein (PF03732.16) |
| Rfam | - |
| GO | - |