Ll_transcript_337055

Id TrinityTRINITY_DN48595_c7_g2_i10
Name TranscriptLl_transcript_337055
SequenceCCTAACTCCCCCACCGCCGCCACCGCCACCGCCACAGCATCAACTGGCTCGTATCCTATAAAGTTCGTCTCATTCTTCCTCCCTTTTTCACTCTAACCCT AATTTATTGCTCCCGTATCCCAAATTCCTAAAGGTTCGAATTTTCAGAATCAGTTGAGCAATGGCGGAACGTCGTCCTTCTAAGCGCTCCAAAATCACGA GGGGGGAAGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTTATAAGTTCATGACCTTTGGGCACCTAAAGTGTAAACCAGGGCCCCGATTGAA TCTTGTTGTTGGACCCAATGGGTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTCGGCCTCTGTGGAGAGCCCCAGTCACTTGGGCGAGCAACGAGT ATTGGGTCATACGTGAAGAATGGAGAAGAGTCTGGCTACATTACAATTACATTGAGAGGGGACCATAAAGAGGAACGTATTACCATTACACGTAAAATAA ATAAAAACAACAAGTCTGAATGGTTGCTAAATGGAAATGTAGTGCCCAAAAAAGATGTTGCTGAAACCATTCAAAGGTTTAACATCCAAGTCAATAATTT GACTCAATTTTTACCACAAGACAGAGTCTGTGAGTTTGCAAAGTTAACTCCCGTGCAACTTTTGAAAGAGACCGAAAAGGCTGTTGGTGATGCACAGCTT CCAGAGCAACATCATGCACTAGTTGAGAAAAGTTGTGCTTTGAAGCAGATTGAGCTGTCTTTGGAGAAAAATGAAGAACGTTTAAAGCAGATGAAGGAGC TCAATGTTGAATTAGAGAAGGACGTTGAGCGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCTGAAACCATGAAGAAAAAATTGCCATGGCTTAAGTA CGATATGAAGCAATCTGAATATCTGGAAGCCAAGGAGCGCCAGAAAGATGCAGAAAATGCATTGAAGGAGGCTGCAAAGATATTAAGTGATCTTCAAGAA CCTATTAAGAAACAGAAAAAAGAGAGGGATGCATTAGATGCAAAATGTCGAAAGGTTATGAGCTGCATAGCTGAGAATGCCAAGAAGCGAACCGAACACG TGGAAAAAGAGAATCTTTTGGAGGTTGAATTACAAGGAAAGTACAAAAACATGGAAGAATTAAGGAGGGGTGTAGAAAGTCGACAAGAAAGACTTCTTAA AGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAAGATGTGCGACCTTATGAAGCTTTTCAGGATGAACTTAAAAGACTAAAAGATGAATATTTG GAGTTGGATTCTTCTGCAAGACAAGTGAGGCAGAGTAAGTCCCAAGTGGAAAACGAAATGAGGCATAAGAGGTCATCCTTGATGCAGTGTAAAGAGAGGT TGAGAGATATGAATAATAAAAATACGAAGTGTTTGCATTTACTGCAAAAATCTGGGGCTGAAAATATTTTCGAAGCTTATAAATGGGTCCAAGAACATCG CAGTGATTTCAATAAGGAGGTTTATGGCCCAGTCCTTGTTGAGGTGAATGTCTCAAGTCAGCTTCATGCTGCATTTCTAGAGGGTCAAGTTGCTAATTAC ATTTGGAAGTCTTTCATAACACAAGATTCTAGTGACCGGGACCTTTTGGTGAAACATCTGAAGCCGTTTGGTGTCCCAGTTTTAAATTATACTGGTGTTG ATGGCCAGCAAAGAGAGCCTTTTGAAATTTCTGAAGATATGCATGCGCTTGGCATCTACTCCCGACTGGACCAAATATTTGATGCTCCTGGTGCTGTCAA GGAAGTTATGATTGAGCAGTTTATTCTAGATCATTCATATATTGGATCAAAAGAAACTGATCAGAAGGCTGCCGAGGTCCCAAAATTGGGAATTACTAAT TTATGGACACCAGAAAATCATTACCATTGGTCTAAGTCTAGATATGGGAATCATATCTCAGCAGTCGTTGATCAAGTTGGACGCCCACAACTTTTATTGA CCAATTTGGATATGGGAGAAATTGAGAAGCTGAGTTCCCAAGAAAGAGAGCTTGAAGAATCTATAGCAACTTTGGAGGAAAATGTTAAAAGGTTTCAAGA AAAGGAAAGAAGCTTACTGAATCAAGCAGCTAGTCGTCGTAAACAGTGGGAGGATATAAGCATTACAGCGAAGAATGAGAAAAGCAAACGTAAAGTGATC ACTGAACGTATTGCACAGAAGAGATTGTTATTGGAATCAAAGGAGAAGGAGGATAATATTGATACTCTGATGGCTAAGCTTTTTGATCAAGCTTCAAACT ACAAAATTGAAAGATTCCACAATGCAATGAAAATTAAGGATCTTCTTGTTGAAGCTGTGGGTTACAAAAAATGTCTCGTTGAACAACGTATGACTTTCTT TGAGCTGGATGCTAAGATTGGAGAATTGGAGGCCAATTTGAAGCAGCATGAGAATGTTGCTGTGCAAACTTCAACTCACTTTAATAACTGTAAGAAAGAG GCTGAGAATTTTCAACAGCAGCTTACAGATTACTTGAAGCATGCAAAATCTATTGCTAGGCTCACACCTGAGTTGGAGAAGGAATTTCTTGAGATGCCTA CTACAATTGAGGAATTGGAAGCAGCTATCCAAGATACCATTTCTCAAGCCAATTCAATCCTTTTTGTCAATCCCAACATATTGGAACAATATGAGCATCG TCAACGGCAGATTGGAGATCTTGCAGCAAAACTTGAAGCCAACAAGAAGGAATCTATGAAGTGTTTAGCTGAACTAAATGACATCAAGGTCAGTTAAGTG TTGGCTTACTTTACGTGGCTAGATTGTTATGTAGTAAATGATTAAGGAATCTAGAATGCATATCTAATGCAACATTTGAATTGATCTTCGCCAAAATATA ATCTGATATTGAGGCTATTGTGTGAAGTTGAGCACGTAGCACTACTACCTTTTGGGTGTTTAGGCCAGTTGAAATGATAGGGTTTTAGGTAGAGGGAGGA AAAGGAATATTCCAAACAATAAAAATTGTAGATATTTAATGTGAATGATAGGATGCAAAAGACATAACACTAACCCTATTTCTGGTTTTATACTTGCATT AGACTCCTAATTAAATAAGGAAACAAATCATAAAAGATA BLAST
Tissuepods
Gene nameLI_gene_162412; 
Additional informationdetails; 

Expression of Ll_transcript_337055

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_337055
BlastpStructural maintenance of chromosomes protein 5 from Arabidopsis with 57.19% of identity
BlastxStructural maintenance of chromosomes protein 5 from Arabidopsis with 57.19% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT5G15920)
CantataDBLink to cantataDB annotations (CNT0002332)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019427495.1)
PfamRecF/RecN/SMC N terminal domain (PF02463.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;