Ll_transcript_337056

Id TrinityTRINITY_DN48595_c7_g2_i11
Name TranscriptLl_transcript_337056
SequenceATAAATAAGGCTACTACAAAGGTATTAACCTTGAACACTATTTGGTTGGATTTCTTCGTTTGACATGTGGAGGGATTGGAAGGCTTTTTGGAGCCAGTGT GCTCTTTTTAATGTGTGTTTTCTGTTTTCCTTAGGAGTATAATTTGTATTTTGTGCTTTTTAATATATTTTAAAGGAAATTTCATCACCATCCCCCAATT TATTTGTTTAATTATCTCTAGTTTTTCTTGCCATGACTCCATCTTGTCTTTAGTAGTGCACACCCCTTTAGTTGTTATGTGTCTGATGTGAGATATGTTG CTATAGGTGATATGCTTATTGTGAAGTTAAATTTTGGTTCTCTGTTGGGTAATAATCTGTTTTTCTCTCTCTTACCTGACTAGTTGTTTGGGATCCTTGG CTTTGTAGTTTTTACCACAAGACAGAGTCTGTGAGTTTGCAAAGTTAACTCCCGTGCAACTTTTGAAAGAGACCGAAAAGGCTGTTGGTGATGCACAGCT TCCAGAGCAACATCATGCACTAGTTGAGAAAAGTTGTGCTTTGAAGCAGATTGAGCTGTCTTTGGAGAAAAATGAAGAACGTTTAAAGCAGATGAAGGAG CTCAATGTTGAATTAGAGAAGGACGTTGAGCGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCTGAAACCATGAAGAAAAAATTGCCATGGCTTAAGT ACGATATGAAGCAATCTGAATATCTGGAAGCCAAGGAGCGCCAGAAAGATGCAGAAAATGCATTGAAGGAGGCTGCAAAGATATTAAGTGATCTTCAAGA ACCTATTAAGAAACAGAAAAAAGAGAGGGATGCATTAGATGCAAAATGTCGAAAGGTTATGAGCTGCATAGCTGAGAATGCCAAGAAGCGAACCGAACAC GTGGAAAAAGAGAATCTTTTGGAGGTTGAATTACAAGGAAAGTACAAAAACATGGAAGAATTAAGGAGGGGTGTAGAAAGTCGACAAGAAAGACTTCTTA AAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAAGATGTGCGACCTTATGAAGCTTTTCAGGATGAACTTAAAAGACTAAAAGATGAATATTT GGAGTTGGATTCTTCTGCAAGACAAGTGAGGCAGAGTAAGTCCCAAGTGGAAAACGAAATGAGGCATAAGAGGTCATCCTTGATGCAGTGTAAAGAGAGG TTGAGAGATATGAATAATAAAAATACGAAGTGTTTGCATTTACTGCAAAAATCTGGGGCTGAAAATATTTTCGAAGCTTATAAATGGGTCCAAGAACATC GCAGTGATTTCAATAAGGAGGTTTATGGCCCAGTCCTTGTTGAGGTGAATGTCTCAAGTCAGCTTCATGCTGCATTTCTAGAGGGTCAAGTTGCTAATTA CATTTGGAAGTCTTTCATAACACAAGATTCTAGTGACCGGGACCTTTTGGTGAAACATCTGAAGCCGTTTGGTGTCCCAGTTTTAAATTATACTGGTGTT GATGGCCAGCAAAGAGAGCCTTTTGAAATTTCTGAAGATATGCATGCGCTTGGCATCTACTCCCGACTGGACCAAATATTTGATGCTCCTGGTGCTGTCA AGGAAGTTATGATTGAGCAGTTTATTCTAGATCATTCATATATTGGATCAAAAGAAACTGATCAGAAGGCTGCCGAGGTCCCAAAATTGGGAATTACTAA TTTATGGACACCAGAAAATCATTACCATTGGTCTAAGTCTAGATATGGGAATCATATCTCAGCAGTCGTTGATCAAGTTGGACGCCCACAACTTTTATTG ACCAATTTGGATATGGGAGAAATTGAGAAGCTGAGTTCCCAAGAAAGAGAGCTTGAAGAATCTATAGCAACTTTGGAGGAAAATGTTAAAAGGTTTCAAG AAAAGGAAAGAAGCTTACTGAATCAAGCAGCTAGTCGTCGTAAACAGTGGGAGGATATAAGCATTACAGCGAAGAATGAGAAAAGCAAACGTAAAGTGAT CACTGAACGTATTGCACAGAAGAGATTGTTATTGGAATCAAAGGAGAAGGAGGATAATATTGATACTCTGATGGCTAAGCTTTTTGATCAAGCTTCAAAC TACAAAATTGAAAGATTCCACAATGCAATGAAAATTAAGGATCTTCTTGTTGAAGCTGTGGGTTACAAAAAATGTCTCGTTGAACAACGTATGACTTTCT TTGAGCTGGATGCTAAGATTGGAGAATTGGAGGCCAATTTGAAGCAGCATGAGAATGTTGCTGTGCAAACTTCAACTCACTTTAATAACTGTAAGAAAGA GGCTGAGAATTTTCAACAGCAGCTTACAGATTACTTGAAGCATGCAAAATCTATTGCTAGGCTCACACCTGAGTTGGAGAAGGAATTTCTTGAGATGCCT ACTACAATTGAGGAATTGGAAGCAGCTATCCAAGATACCATTTCTCAAGCCAATTCAATCCTTTTTGTCAATCCCAACATATTGGAACAATATGAGCATC GTCAACGGCAGATTGGAGATCTTGCAGCAAAACTTGAAGCCAACAAGAAGGAATCTATGAAGTGTTTAGCTGAACTAAATGACATCAAGGGAAAATGGCT GCCAAAACTGAGAAACCTCGTGGCTCAGATAAATGAAACTTTTAGCCATAATTTTCAGGAGATGGCTGTTGCTGGAGAAGTTTCACTAGATGAACATGAT ATGGACTTCGATCAATTTGGAATACTTATAAAAGTCAAATTCAGAGAAACTGGACAGCTTCAAAATCTGAGTGCCCATCATCAATCTGGAGGGGAGCGAT CAGTTTCAACTATTGTTTATCTTGTTTCTCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATAAATCAAGGGATGGACCCAATAAATGA AAGGAAGATGTTCCAGCAACTAGTGAGAGCTGCAAGCAAACCAAATACACCACAGTGTTTCTTGCTCACCCCAAAGTTGCTACCCGATCTACAATATAGT GACGCTTGTAGTATATTGAATGTAATGACTGGTCCTTGGATTGAGCAAACGTCAAAGGTCTGGACTAATGGTGATCGATGGGGTATTATCACTGGACTTG TACAATAGACCAATTGCTAGGGAACTACATCATAAGGAATCTATTAAGTTTGTGAGATTTGCTTACCTTTTTTCATATGTATATTTTGTGGAGGAAAAAA AACACTTTGCATTTGAACCAAAGTGTTCATGTTTCAGTGGTTGGATATGTCCAATATTGTAAATATCTTTGTCATAATTTAACCCTCGTTCCAGTATTTC CTGTATAATAGTAGTATGGTTGTACCCAACTTCTGGGGCAATATTCAAGGAATTTTGAGTAAGGAACAATTGTTGTCAACTTTAATAACTTGTTGATTGT ATGGTAGATCTGTTGCAATTCCATAGCACAGTCCTTAAAATAAGCCTTTCTAAAATCATGTTCAAATAAAGTGTTTGACATCTAATATAATGAAAGAGAG AAT BLAST
Tissuepods
Gene nameLI_gene_162412; 
Additional informationdetails; 

Expression of Ll_transcript_337056

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_337056
BlastpStructural maintenance of chromosomes protein 5 from Arabidopsis with 58.72% of identity
BlastxStructural maintenance of chromosomes protein 5 from Arabidopsis with 59.87% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT5G15920)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019427495.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;