| Id Trinity | TRINITY_DN48595_c7_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_337047 |
| Sequence | CCTAACTCCCCCACCGCCGCCACCGCCACCGCCACAGCATCAACTGGCTCGTATCCTATAAAGTTCGTCTCATTCTTCCTCCCTTTTTCACTCTAACCCT AATTTATTGCTCCCGTATCCCAAATTCCTAAAGGTTCGAATTTTCAGAATCAGTTGAGCAATGGCGGAACGTCGTCCTTCTAAGCGCTCCAAAATCACGA GGGGGGAAGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTTATAAGTTCATGACCTTTGGGCACCTAAAGTGTAAACCAGGGCCCCGATTGAA TCTTGTTGTTGGACCCAATGGGTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTCGGCCTCTGTGGAGAGCCCCAGTCACTTGGGCGAGCAACGAGT ATTGGGTCATACGTGAAGAATGGAGAAGAGTCTGGCTACATTACAATTACATTGAGAGGGGACCATAAAGAGGAACGTATTACCATTACACGTAAAATAA ATAAAAACAACAAGTCTGAATGGTTGCTAAATGGAAATGTAGTGCCCAAAAAAGATGTTGCTGAAACCATTCAAAGGTTTAACATCCAAGTCAATAATTT GACTCAATTTTTACCACAAGACAGAGTCTGTGAGTTTGCAAAGTTAACTCCCGTGCAACTTTTGAAAGAGACCGAAAAGGCTGTTGGTGATGCACAGCTT CCAGAGCAACATCATGCACTAGTTGAGAAAAGTTGTGCTTTGAAGCAGATTGAGCTGTCTTTGGAGAAAAATGAAGAACGTTTAAAGCAGATGAAGGAGC TCAATGTTGAATTAGAGAAGGACGTTGAGCGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCTGAAACCATGAAGAAAAAATTGCCATGGCTTAAGTA CGATATGAAGCAATCTGAATATCTGGAAGCCAAGGAGCGCCAGAAAGATGCAGAAAATGCATTGAAGGAGGCTGCAAAGATATTAAGTGATCTTCAAGAA CCTATTAAGAAACAGAAAAAAGAGAGGGATGCATTAGATGCAAAATGTCGAAAGGTTATGAGCTGCATAGCTGAGAATGCCAAGAAGCGAACCGAACACG TGGAAAAAGAGAATCTTTTGGAGGTTGAATTACAAGGAAAGTACAAAAACATGGAAGAATTAAGGAGGGGTGTAGAAAGTCGACAAGAAAGACTTCTTAA AGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAAGATGTGCGACCTTATGAAGCTTTTCAGGATGAACTTAAAAGACTAAAAGATGAATATTTG GAGTTGGATTCTTCTGCAAGACAAGTGAGGCAGAGTAAGTCCCAAGTGGAAAACGAAATGAGGCATAAGAGGTCATCCTTGATGCAGTGTAAAGAGAGGT TGAGAGATATGAATAATAAAAATACGAAGTGTTTGCATTTACTGCAAAAATCTGGGGCTGAAAATATTTTCGAAGCTTATAAATGGGTCCAAGAACATCG CAGTGATTTCAATAAGGAGGTTTATGGCCCAGTCCTTGTTGAGGTGAATGTCTCAAGTCAGCTTCATGCTGCATTTCTAGAGGGTCAAGTTGCTAATTAC ATTTGGAAGGTAATTTTTTAATATTTAAGTATTTAATCTCTAAACTGTTAAATTAACTATGCTGAGACATATAATCACCTAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_162412; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337047
| Blastp | Structural maintenance of chromosomes protein 5 from Arabidopsis with 59.83% of identity |
|---|---|
| Blastx | Structural maintenance of chromosomes protein 5 from Arabidopsis with 59.83% of identity |
| Eggnog | Required for chromosome condensation and partitioning (By similarity)(COG1196) |
| Kegg | Link to kegg annotations (AT5G15920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427524.1) |
| Pfam | RecF/RecN/SMC N terminal domain (PF02463.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |