Ll_transcript_338190

• Id Trinity: TRINITY_DN48597_c7_g1_i2
• Name Transcript: Ll_transcript_338190
• Sequence: TTCATTATGAACTCCACCTTTTTTTCACACCTTATTCACTTGCAACAAATGCTTTTTCAGTCAAACGTAATTCTATCATTTTACTATCAGTCTCTGTTTA GTTGCAGTTTGATGTTAAAAAATATATAATAAAGTCTATATGAGTTTAATATCAGGGTTGATTATATGATCATGATCAATATGTGTTGATTCTATTGGAA TGAACATGAGGTCATTGTATTCATATATTTTAGTTTCTCACCAAGACACTGAAAATAAAATATATAGGAAGAGAATGAATATTGCAATCTTTTTACACGT AATCTATGTCAGTGGAAACACCCGTGACCTCTCATTCTGTCATTGATTCTCTGATTCAGCTTCACTTTCCAGTTTCCACCTATAATCATGTCCTAACTAA CATGCATATATAAATTATCCTACAAACCATTCTATACACCACTTCTAATCCAAAACAACATTCTCCACTTTATGCCCTTTCAGAATGTCAAATTTGCATT ACATTTTCTCTGTTTTAGTGCTTCTTCTCCTTCTCCAAAATCCCATTTCAACACAAAGCCACACAAAGGGAATTAGACCAGGGCGTTCAGAAGGGAATGG GGTAACCACAAACATGACCAGAGTCCAATTTTCAGAACAACAGTTCATGAAATGGGTTAAGTTTGTTGGTGGTCTCAAACACACTGTTTTTGGGACAGCA AAAAATAAGCTTTTTCCTTCACTCACTTTGCAAGTTTCTAAGAATCCATCTAAAGGAGATTTTTCTTCAATTCAAGCAGCCATTGATTCCTTACCATTCA TCAATCTAGTGAGAGTTGTTATTAAGGTTCATGCAGGGGTTTACACGTAAGTACTAGGATTATGTTTATTTATTTGTTGGGTACAAGTATTATATTTCTT TAATTCCACTTGAATTATAAGTATTAAGTCATATTGCATTCTGCTCCTTTTGCTTTGTGCCCATAGTTTATGCATAGCCTTGGCATTTTGTTCTTGTAAA ATGTGGATTTTGATGTTTGCGGTGTCTACATTATATAGGAAAACGATAATAATTTTATGTCCTTTTCTTTCTAACTAAATTGCTCAATGAATTGTTCTTT GCTAAAGAAGACTTTGCAGATAATAAACTGTCCTTTCTTTTAACTGTGTCTTCTCTTTTCTCTCTCTTTATTTCACATTTTGCAAAAAAGTTAGAAATTT GACAGAATTGATTAAATTAAATTAAATAAATTGTTATCAAATTATTCTGTCAAAATTGCTACCAAATAAGTTCTGACTGGTTAACATTTTTCTAATTCTT ATTGATGTGACGAATTCTGAATTGCAATTCAATGAAAATCCCTTATTTGCTCCTTGTCAATATTGCTTCTGTGTGTTTTTAATTTATTTATTTACAGGGA GAAAGTTAATATTCCGCCATTGAAATCCTTCATAACAATACAAGGATCAGGAGCAGATAAAACCATTGTTCAATGGGGTGACACAGCTCAAACACCAGGG CCAAGAGGCCAACCACTAGGAACATATGGTTCTGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCAAAGAACATAACATTCAAAAACACCACCCCGG TTCCGGCACCAGGAGCAGTTGGAAAACAGGCCGTGGCATTAAGAATTTCAGCAGATACAGCAGTATTTCAAGGCTGCAAATTCTTAGGGGCACAGGACAC ACTCTATGATCATCTTGGTAGACACTATTACAAGGATTGCTATATTGAAGGCTCAGTTGATTTCATATTTGGCAATGCTCTCTCTCTATTTGAGGGATGT CACGTGCATGCAATAGCACAAAACACAGGAGCATTAACAGCCCAAGGAAGGGGCAGTTTATTAGAGGACACAGGTTTTTCTTTTGTGCACTGTAAAGTCA CGGGCTCAGGAGCACTGTACCTTGGAAGGGCTTGGGGACCCTTTTCTAGGGTTGTCTTTGCTTACACTTATATGGACAATATCATTATTCCCAAAGGCTG GTATAACTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGACAGTATAAATGCACAGGACCAGGTGCAAAGTTTGCAGGGAGAGTATCATGGTCA AGAGAGCTCACTGATGAGGAAGCTAAACCATTTATTTCAATAAACTATATTGATGGTTCTGAATGGATTAGGGATATTTTTTGATTTGAGATAAAGATAA GTTTGAGTTACTTTGGTGACAAAATTTTGATGTATAAATATGGATGTAAATTAAAATTTGATAGTTTCATACATAATCCTTAATCTCTGTTGCTTGATTT AGAATCATAACTCATTTTACTTGGATAGTTCTCGATTAGAGTTGGACATCTCCCATTATTATCTGGATGGTGATTAGAGTACCAATCCATATGAAAATTT TCAGATATTCATAGTATCAATAACCTTGAAGTGGTACAACATTCATTCCACATGTACCCAGTTTTCCCGAGTGGCTCTGATATTACATTGGTCGGGAGCC TCCTATCATAATAGGCCTTCTATTATAATAACA
• Tissue: pods
• Gene name: LI_gene_162431;
• Additional information: details;

Expression of Ll_transcript_338190

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 1
• PS3: 0.7
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338190

• Blastp: Probable pectinesterase 53 from Arabidopsis with 63.27% of identity
• Blastx: Probable pectinesterase 53 from Arabidopsis with 80.84% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (AT5G19730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446394.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;