Ll_transcript_338194

• Id Trinity: TRINITY_DN48597_c7_g1_i6
• Name Transcript: Ll_transcript_338194
• Sequence: TACACTTATATGGACAATATCATTATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAACCGTGAAATGTAAGTTCATCTCTCTTTTCTTTCTCTTATTT TTATTAGAATGTGTTTTTGTTACTATGAAAATTGTTCTACTCTTTAGAATGATGTGAACAATTTCTTTTTACCATTTTATTAATAAATTATTTTAAAAAT ATTTGTAAGGGGTTAAATTAAATCTTCAGATTAAGCCTATCAAATTGCACCTCCAAAGTAATAGTTTATTTTTCTTCAGTGTAAACAAACTCTGATCCTT GATCCTTGGCCCTTGGTAAATAATATTTTGAATTTTTTTATTACAAGTAGTTATAATTACATTCCATAACTTGCTACTTGTAAATTGTAATTCACAAACA TGGGGTTTTTAGGATTATTTTACCTCAAAATGATGTAGTGTCATCTCACTAACGGAAAGGGCAATATTCTGCTCTAAATAAATTATATTTTGTTGACCAA CGAGTGAGGGTTCAAATGTACATGATTGATTCTCCTTAAGCAAAATCTCGGTTTCGAATCTTATAGATGGAGAGTTAGTCTCACATACCTATGTATGTTC CCGACTCGGACATGATTGCCTCTAATATGAGGATACTTGATGAAACAAAAAAAATCATATTTTGTTGATCTGTTCTGAATTACATTCTTTGAACTATAAC CCTTTTAGGCTTTTTGCACTATCATCAGTCTCCATCATGCTATATCAGAACAATGAATGAGTCCAGTTCCATGATAGAATAAAGGCATATAGGGTATCTA GTTATGCTGATGTACCATGAACAACAGAGAGTTAACATTATATGTTTGTCCACTCTCTTTAGCAATATCTACATGGTGTGTAGTGTAAATCTACGTGTTA CATGCTTACCCATTTGGTCTTTTCCACTACATAATAAAACAGAGAAATTATTGAAGAATAAGAAATTAGGATCAGCACTGTCTAGATCAATGATTCTTGA ATCTGCATGTGCCTATAATGCTTAGCTAAACAAACTTTTTAAGATAACTTCCAAATATTTTGTAGCAAGGGTTTTATAACCTTTTTAAATTGTTATTATA ATAACTTATATAAGTGTCCACACTTCAAATTCCCAACCATTAATGCACATTTAATTGATTGTGACTCATAGGCACCGAACTCACCATGATTTTAAATTAG TAATCACATGGTACACTTTTTTTCTTCTTGTATAAGTAAGAATATCATTTCATCCTATAGATAAAGAACGAATTACTTTCTAGGTACATGTCTGCTCCTC TAACAAGTGTCGCTCTAAAAAAGTGAACATTTTATTTTTTGCTCTGATTTAAGATCCAGTAAAACCTTACATCATTATATCAACATCTTATTCATATATA GTACACAATTTACTACAAGTACAATAAATATACTATAGGCACAACTTAAAATCATGGTGAGTACTATATACGTTTATTGATTGAAAATGTAAGTAGATAC ACGGGAGTTCTGCCATAGAACTAAATGGCTCTCTTAATGCTTATATAGATAAGGCAAAAGCAGCATGCGCATAGGGTCTGAAAAGAGCCTCATGCCTCAG CCACCTAATCCCACAACATCAACTATTCTATATCTTTATATATCACTACACATATATATAGCTATATAGTTTATATAGATATAGATATATTGGCATGCGC ATGTGAGTGCGGTTTCTGGTTTGTTCTAAACTTCTAATGTTTTTTGTATTGTGTTGGGTCCACCACCAATACCAGGACTGTATTCTATGGACAGTATAAA TGCACAGGACCAGGTGCAAAGTTTGCAGGGAGAGTATCATGGTCAAGAGAGCTCACTGATGAGGAAGCTAAACCATTTATTTCAATAAACTATATTGATG GTTCTGAATGGATTAGGGATATTTTTTGATTTGAGATAAAGATAAGTTTGAGTTACTTTGGTGACAAAATTTTGATGTATAAATATGGATGTAAATTAAA ATTTGATAGTTTCATACATAATCCTTAATCTCTGTTGCTTGATTTAGAATCATAACTCATTTTACTTGGATAGTTCTCGATTAGAGTTGGACATCTCCCA TTATTATCTGGATGGTGATTAGAGTACCAATCCATATGAAAATTTTCAGATATTCATAGTATCAATAACCTTGAAGTGGTACAACATTCATTCCACATGT ACCCAGTTTTCCCGAGTGGCTCTGATATTACATTGGTCGGGAGCCTCCTATCATAATAGGCCTTCTATTATAATAACA
• Tissue: pods
• Gene name: LI_gene_162431;
• Additional information: -

Expression of Ll_transcript_338194

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.5
• PS2: 2.3
• PS3: 1
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338194

• Blastp: -
• Blastx: Probable pectinesterase 53 from Arabidopsis with 68.52% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (AT5G19730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446394.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;