Ll_transcript_338196

• Id Trinity: TRINITY_DN48597_c7_g1_i8
• Name Transcript: Ll_transcript_338196
• Sequence: TTCATTATGAACTCCACCTTTTTTTCACACCTTATTCACTTGCAACAAATGCTTTTTCAGTCAAACGTAATTCTATCATTTTACTATCAGTCTCTGTTTA GTTGCAGTTTGATGTTAAAAAATATATAATAAAGTCTATATGAGTTTAATATCAGGGTTGATTATATGATCATGATCAATATGTGTTGATTCTATTGGAA TGAACATGAGGTCATTGTATTCATATATTTTAGTTTCTCACCAAGACACTGAAAATAAAATATATAGGAAGAGAATGAATATTGCAATCTTTTTACACGT AATCTATGTCAGTGGAAACACCCGTGACCTCTCATTCTGTCATTGATTCTCTGATTCAGCTTCACTTTCCAGTTTCCACCTATAATCATGTCCTAACTAA CATGCATATATAAATTATCCTACAAACCATTCTATACACCACTTCTAATCCAAAACAACATTCTCCACTTTATGCCCTTTCAGAATGTCAAATTTGCATT ACATTTTCTCTGTTTTAGTGCTTCTTCTCCTTCTCCAAAATCCCATTTCAACACAAAGCCACACAAAGGGAATTAGACCAGGGCGTTCAGAAGGGAATGG GGTAACCACAAACATGACCAGAGTCCAATTTTCAGAACAACAGTTCATGAAATGGGTTAAGTTTGTTGGTGGTCTCAAACACACTGTTTTTGGGACAGCA AAAAATAAGCTTTTTCCTTCACTCACTTTGCAAGTTTCTAAGAATCCATCTAAAGGAGATTTTTCTTCAATTCAAGCAGCCATTGATTCCTTACCATTCA TCAATCTAGTGAGAGTTGTTATTAAGGTTCATGCAGGGGTTTACACGGAGAAAGTTAATATTCCGCCATTGAAATCCTTCATAACAATACAAGGATCAGG AGCAGATAAAACCATTGTTCAATGGGGTGACACAGCTCAAACACCAGGGCCAAGAGGCCAACCACTAGGAACATATGGTTCTGCAACTTTTGCAGTGAAT TCACCTTATTTCATTGCAAAGAACATAACATTCAAAAACACCACCCCGGTTCCGGCACCAGGAGCAGTTGGAAAACAGGCCGTGGCATTAAGAATTTCAG CAGATACAGCAGTATTTCAAGGCTGCAAATTCTTAGGGGCACAGGACACACTCTATGATCATCTTGGTAGACACTATTACAAGGATTGCTATATTGAAGG CTCAGTTGATTTCATATTTGGCAATGCTCTCTCTCTATTTGAGGGATGTCACGTGCATGCAATAGCACAAAACACAGGAGCATTAACAGCCCAAGGAAGG GGCAGTTTATTAGAGGACACAGGTTTTTCTTTTGTGCACTGTAAAGTCACGGGCTCAGGAGCACTGTACCTTGGAAGGGCTTGGGGACCCTTTTCTAGGG TTGTCTTTGCTTACACTTATATGGACAATATCATTATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGACAGTA TAAATGCACAGGACCAGGTGCAAAGTTTGCAGGGAGAGTATCATGGTCAAGAGAGCTCACTGATGAGGAAGCTAAACCATTTATTTCAATAAACTATATT GATGGTTCTGAATGGATTAGGGATATTTTTTGATTTGAGATAAAGATAAGTTTGAGTTACTTTGGTGACAAAATTTTGATGTATAAATATGGATGTAAAT TAAAATTTGATAGTTTCATACATAATCCTTAATCTCTGTTGCTTGATTTAGAATCATAACTCATTTTACTTGGATAGTTCTCGATTAGAGTTGGACATCT CCCATTATTATCTGGATGGTGATTAGAGTACCAATCCATATGAAAATTTTCAGATATTCATAGTATCAATAACCTTGAAGTGGTACAACATTCATTCCAC ATGTACCCAGTTTTCCCGAGTGGCTCTGATATTACATTGGTCGGGAGCCTCCTATCATAATAGGCCTTCTATTATAATAACA
• Tissue: pods
• Gene name: LI_gene_162431;
• Additional information: details;

Expression of Ll_transcript_338196

FPKM

• PAB: 0.8
• PNAB: 2.1
• PS1: 3.6
• PS2: 12.6
• PS3: 9.2
• PW1: 0.7
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338196

• Blastp: Probable pectinesterase 53 from Arabidopsis with 76.19% of identity
• Blastx: Probable pectinesterase 53 from Arabidopsis with 76.19% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (AT5G19730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446394.1)
• Pfam: Pectinesterase (PF01095.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;