| Id Trinity | TRINITY_DN48609_c6_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_369748 |
| Sequence | GAAAAAGACACACCTGTCCCCAAAATCAACTATTCCGATAGCCGTTACATTCACGCAAGTGACCCACACCCTTCACGAACCCAAAATTACCATTTTGCCC TTATACCTGCATCAACTTTCACATCCTATAAATACGAAACCGCGTTTCCTCTCCCTTTTTCGAATCTCAGATCTCTATTTCTCTTCCTTCTTCGTCAAAA AGATAAACATATTTTAGTAGCTACTCATGGGAACTGTTGTTGAGGCTGCAAACAAGGGTGCAAATGGAAGTATCCCACAGAAAAATCCTACAGTTGTTTT TGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGCGCAAACATTGTCCAACATTTTGGGTATACTCACCTCAGTGCTGGTGATCTTCTGCGAGCA GAAATCATATCTGGTTCTGAAAATGGAACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCAGAGGTAACAATTAAGCTTCTGCAGCGAG CAATTGAGGAAGATGGCAATGACAAATTTCTTATTGATGGTTTCCCTCGCAATGAGGAAAATCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGC ATTTGTCCTGTTTTTTGATTGCCCTGAGGAAGAGATGGAGAAGCGACTTCTTAGTAGGAACCAGGTTGATTATTTTCCATCTAAGATTTATTTTTATTTC CTTGTTTTCGGCAACTTAATACTTTTTGTTGATAATAAAAAGGGCAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTCTTCTTGGAGT CTAGTCTCCCAGTGATTAATTATTATGATGCAAAGGCAAAAGTTCGTAAGATTGATGCTGCAAGGCCTGTTGAAGAGGTATTTGAGACAGTCAAAGCAAT TTTCGCTCCAAAAAATGAGAAGGCTGATTGAACTCACCCTTGACTTCATTCTGGAAATTTAGAGGTAAAAGTTCTACCAAGAATAGTAAAGGATCCATAT ATTATGTTTTTTTTCGTATGATTCTATTTACTGCAAAATATTGAAACCTTTGATCTCCTTCATAGCTAGTGGGACCAATACTTTTTTCTGAGTGGGTGTG ATAGATTACCAGAAGTTCATTCTTCTAATAGGGGACAAATTATGTTAGGGTAGTGTGGCAATTGGGATCATAAGAGACTTATGCCATCTTATAAAGTTAT TTAAGCTGAATATGTCCTTCCAAGTAGTAAGGCATCAATTCTCTTTGAGTATATATACCCTTTGGATCTATGTGTGGGCAATCTCTCTGGACAAGGTCAC ACGCTTAAGCATCTTTGTCTAATACTTTTATATATTCTATTGGTTATATGGTAAGGTGCTGAAAAAAGTAAAGAATATTCTGATGAGATTGATTATAAAA GACACATAATTGATTCTATCTCACATCTATCAGTAGTTTTGGCTGTAATTTTGGTATTATTAATTGGGTAGCTCAAGTTTGTGTTGAGTATGGATTTGAA AAGCTACTGGCCACCAACAAGATGTTGGTCTAGGTATTAGGTCGTATTAGATCCCAAATAGATTAAAACGGTCAAAGGATCGAATTCTTGGAATGACACT TATCGGGAGCGATAGTCGTGTACCCTGAAATAAATTAGTTCTTTACTCATTGAGTGAGAGATACTTTTGTTATACAAAAAAATAATAAAAGCTTGAGCTC CCTTCTCTTTTCCTATTTAGTTTTAAGGGAATAAAGTATCTCGAAGATAACTTATCTCCTTAAATTCATTTACTGTTTGACATGTGTTTTAATTTTATTT TTATAATAATATTTTTAAATGAAAACTTATAGAAAGAAGAGAAATAAGACATATATCAAGTAGTGAATGGATTTATGGAGATGAATTATCTCCTGATATA AGGAGATACTTTATTCTCTTTGATTCAGTTTAAAAAATGAATAAAAGTTGAGGGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162552; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369748
| Blastp | UMP-CMP kinase 3 from Arabidopsis with 73.5% of identity |
|---|---|
| Blastx | UMP-CMP kinase 3 from Arabidopsis with 73.5% of identity |
| Eggnog | Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity)(COG0563) |
| Kegg | Link to kegg annotations (AT5G26667) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465456.1) |
| Pfam | AAA domain (PF13671.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |