| Id Trinity | TRINITY_DN48610_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_369433 |
| Sequence | CTTGAGTTTGTGTTTTTTCACACCTGTCATTACCTACCTCTAATTATCTTCACAAGCATCGCCTCAAAATTCTCTGTATAAAATTTTTGTCTGGTTGTTG ACATCAGCAAACTTCTCCTACTTTAAGTGTTTGATTCATTATTTCAATATTCATTGTTTCTTCATCAACGATGAGGCGCCACTTAACAAAACTCATTCGT TCAAGTTTTGGGTTCAAACCATCAAAATCCTTGCTGGTGAATTGTGAGATGGGGGCTTATTGTGCCTCAAGAAATACTAATGGTCAATCTTTATTCTTTG GCAACATGAATGAATATACAGCAAGAACCTATGTAAGATCTTGTTCTTCCTTGTCTGAAGATCAGCCAAAAGATAATTCTGTCTCTGATATGTTAGTAGA TTCATTTGGAAGGTTGCACACTTACTTGAGAATATCCTTAACAGAGCGGTGCAATCTAAGGTGTCAGTATTGTATGCCGGAAGATGGTGTGGAGCTTACT CCTAGGCCTCAACTTTTAACGAAGGCTGAGATTCTGAGAGTAGCAAATCTTTTCGTAAGCGGTGGGGTAAATAAAATACGTTTGACTGGTGGTGAACCAA CTGTGAGAAAGGATATTGAAGACATATGTTTGGAGTTGTCAAACTTGAAGGGACTTAGGACACTGTCCATGACTACCAATGGTATTGCCCTCGCAAGAAA ACTCCCAAAGCTAAAAGAATGTGGACTTACTTCTTTGAACATTAGTTTAGATACTTTAATTCCTGCAAAATTTGAGCTTATGACTAGGCGCAGAGGGCAT GAAAAAGTGATGGATTCAATTAATGCTGCTATAGACCTTGGGTTTAATCCAGTCAAGGTCAATTGTGTTATAATGCGTGGATTCAATGATGATGAAATAT GTGACTTTGTTGAGTTAACACGTGAAAAGCCAATTAATATCCGGTTTATAGAGTTCATGCCTTTTGATGGGAATGTTTGGAACGTCAAGAAACTCGTACC CTACATGGAAATGATGGATACAGTGGTTAAACGGTTTCCAAGCTTAAAGAGAGTTCAAGATCACTCTACAGAAACAGCCAAGAATTTCACAATAGATGGA CATCAAGGTAGAGTTTCATTTATCACGTCGATGACTGAACATTTTTGTGCTGGTTGCAATAGATTGCGACTACTAGCCGATGGAAACTTCAAAGTCTGTT TATTTGGTCCTTCAGAGGTAAGTTATGTCCTAGCTATCAAAATTCAGTATATTGTGTGTGTTGCTGAAACTAGTTGATTAAGTTTGACTAGAATATGAGG TTATATATATGTACAAACGTTAATGTGGTTTTTGGTGAATCTGCATGGCTACAACTTTTGATGATGATGGAAAGAAGTTATAGGCTTTTAAATCCAAACC TGTATTGAGATCGAAGATTGAAAAGAGTGAACAAGGTCTGCATTAACCGGATTAGTATTTAAGGCCTTAATGCTATTGAAAACCTTTAGCGTTCTTGGAT TTTAAATAGGGTGTAGCAGATTCTTTGCAGTTAGTTGATGCCGAGTGTGAGACTATGGGTAGTTGTTTTATACAATTGATCAATGGCTTTACAGAATAAA AGGAGAAAGAGTAGGCAATGTTAGATTAGAACCTTGAATCTGAATTTCTTCTACTGTAGGTTTTTTTTAGATGTATACTTAGTTTTGGGAAATAGTGAAA CTGTCGGACAAATTGTTAATAGACTGACATAAATTTCAGAAAATCGCTCGACAATTAAGTAGTCTGAAGTACCCTTCAGAAAGTGGATTTATTTAGTCAA TCTTGAAGTATTTTACTCAATGGGAAATTTTCGCACAATAAGTCACGATCTTTAACATAATTTATCCATTGTAGTTATTTAGTGCATATGCTATTTCATA TGATATTCCATTTAGTTGTTGCCTTATGGAGACTTCTTAGATGCATCATCCCTCTAGGTTTTTAATATCCATTTTGTTTACTCATGTACTGTTTTACATT TGAGATTCACATCACATTTATTTTGGGAAATGGTACTGAAAGTAAAATGCATCTTGTACAATATTGCATTCATTGAACTTGATAAGTGCTCACCTTCTAT AAGGTGATTGTTGATGATATATTAATGCATTTATTGAACTTGTGGATGGAAAAAATACCTGCTAGGAGAGTTAGCCCCATATACCTGTGGATGTTCTCGG CTCGGATAAGATTGCCTCCAGTGTGAGGATACCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_162562; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369433
| Blastp | GTP 3',8-cyclase, mitochondrial from Arabidopsis with 73.22% of identity |
|---|---|
| Blastx | GTP 3',8-cyclase, mitochondrial from Arabidopsis with 73.22% of identity |
| Eggnog | Catalyzes, together with MoaC, the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity)(COG2896) |
| Kegg | Link to kegg annotations (AT2G31955) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454459.1) |
| Pfam | Radical SAM superfamily (PF04055.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |