Ll_transcript_368837

• Id Trinity: TRINITY_DN48613_c1_g2_i10
• Name Transcript: Ll_transcript_368837
• Sequence: ATTTTCTGACCCACCACACTCCCTTTCTATCTCTACCACTTCCTCTATAAGCCAAGCCACTCAAACCGTGTCATCCCACACACAATAGACAAAGCTCAAT AACAACACCTCCTAGTGCTCACACCTTTTTCTCTTTCACCCTTTTCCTTTTTTCTTTTTCCACAACTACATTTAGCTAGGGAATCCCACCCCACTTTTAT TAAACCTAACAACCATACTTAAAATATAATAACCATTATTATATATATCTTACTTAATCCCATTCCATTCCATAAATCTTTGTTCTTCTCCAATTCTAAC TAACATAGGTCCCCATTATCAATTACTAGTAATACTCCCTTGGCTTCATTTGATCTTTGCTACAAAAGCAAAACAACTCCATTTTCTCTTTTCACACTTA ATTATCTTTCCTCTCATTTCCTCTTCTCAGAAAACTTTCCACGCGTTCAAGTTTTTATCCCTTAGATGCTGAACGCGTTCAATTTAATCCAAATTCTAAT CTTAATTACTTCTTCAACCACCATCAGTGCACGTTAACGGCGTACGCCAAATCACACTATATAACAAAATTTCATTCCCTTTAGTTTAAAAAAGTTAAAG GGAGAGAAGCATTGCATTCTTTCGTTCTGGTTTTGTGTGATAATAAGATATGAATGGTGTTCCGAAACATGAGCGGCGGTGGGCGTCGGACACTGTTCCC GGAAAAGTAACCGTCAGCACTGAAACTTCGCCGGGAGCAGAGTCCTTCTCCACTGCGGAGGAGTTTGTGGAGGTGACACTCGATCTTCAAGATGACGACA CTATTGTTCTTCGTAGCGTTGAGCCAGCCTCCGTTGTTGACATCGCCGACGATGCTGTCGCCGGGAGTAGCGGTTATAATACTCCGGCGTCGGTTCCGAG TACTCCGTCGATTCGGAGGACCTCGTCCCGAGGTTTCCGGCATTTCTCGCAGGAGCTGAAGGCGGAGGCGGTTGCCAAGGCCAGGCACTTCTCGCAGGAA CTCAAGGCGGAGCTACGGCGGTTCTCGTGGAGCCATGGCAACACATCACGTGCTCATTCAACTTCTACGGCCGGAGGTGGTGGTGGTGGCGCAGGAGCTG GATTTGAGACGGCGTTGGCAGCGAGAGCTCTGAGGAAACAACGTGCTCAGCTAGATCGAACTCGCGCCGGTGCTGTGAAAGCGCTTCGTGGTCTCAGATT CATCAGTAAGAAATCAAACGGCGTTGATGCGTGGAACGAAGTACGGAGTAACTTCGATAAGCTTTCTAAAGACGGTTATCTCTATCGCGCTGATTTCGCT CAATGCATAGGGATGAGAGATTCTGCAGAATTCGCTCTGGAATTATTCGATTCTCTGAGTCGTAAACGAAGAATGAGAATCGACAAGATTAGTAGGGATG AACTTTTCGAATTCTGGTCCCAAATCACCGATCAAAGTTTTGACTCACGGCTACAGATCTTCTTCGACATGGTGGACAAGAATGAAGATGGGAGAATAAT GGAAGAAGAAGTAAAAGAGATTATCATGTTAAGCGCTTCAGCAAATAAATTGTCCAGGCTGAAGGAGCAGGCGGAAGAATATGCAGCTCTGATCATGGAA GAGTTAGACCCGGAAAGACTTGGTTACATTGAGCTATGGCAATTGGAGACACTTTTATTACAAAAGGACACGTACCTCAACTACAGCCAAGCTCTAAGCT ACACAAGCCAAGCTTTGAGCCAGAACCTACAAGGACTAAGGATGAAAAGCCCAATACGTAGGATGAGCTTCAGATTCCTCTACTATTTGCAAGAGAATTG GAAGAGACTTTGGGTTTTAACATTGTGGGTTGCCATAATGATTGGGTTGTTCGCGTGGAAGTTCTTTCAGTATAGGAACAAAGATGTTTTCCAGATAATG GGTTACTGTCTTCTCACAGCTAAAGGTGCAGCTGAGACTCTTAAATTCAACATGGCACTTATACTCTTCCCCGTGTGCAGAAACACTATAACTAAGCTCA GGTCTACTAAGCTGTCGTGCTTTGTACCCTTTGATGACAACATTAACTTTCATAAGGTACCCACCAACATCACAAGAAATCCTCTTGATTTTATTTTATT TTGTTGAGTACACCTCTTGAATATATAAACATTGATAGTGGACGCCATCAATAATTCTAATTCCAAATTGATTTTTAGTCGTGTGCCCTGACATTATATT TGTTCATATAAACTTCGTGAATTTAACACATGCAGTGGTCGTTAGCAAAATTAATGGGTACCCTCAGCAAATTAGGTGAAAAATGCAAAGTATTTCTAAA ATAAAATGTGATCTAAATTCTAAAGTTAAATTTGTCAAAACAGTAATTTTCTTAATGTTTGGCGGTATTAATCTTCAATTCCACCATCAAAACATAAAGT TGTAACATTGTAGAATTGAAAAATAACTTGCTTATAATGGCCAGATTTTTATATTGTTGATTACTCATAATGAAATAAATTAAATATTTGTAACATTTAT TTTGTATTAGCTTTATATATTTGCTAGTGAACTGATGATAAAAAATTGAAGATAATAGACAAAAGTTTTAAGAAACTTGAAGTGCACAAGAAAAATAACT TGCTTATAATGGGTAGATTTGGTATTTAGTTGATTACTGATAATGAAATAAATTAAATCTATGTAACATTTATTTTGTATTTGCTAGTGAAATGATGATA AAAAATGAAGATAATAGACAACTTTTAAGAAACTTGAAATGCATAAGGAAAACATTCTTCTCTCAGCCACAAAAATATATAGAAAAGGATGCCATAAACA ATAAATTTATGTGTACTTAAAGTAAATTATTTGATTTTCTGTCTTACTTTTGATACCTACAGACAATTGCTGCGGCCATCGTGATTGGTATTATACTTCA TGTTGGAGACCACCTTGCTTGTGATTTTCCAAAACTTGTGCATTCGTCTGAACTACTTTATGAGAAGTATTTAAATGGCGTATTTGGTCATCACAAACCC AGTTATATAGACCTAGTTAAAGGGGTCGAGGGTGTGACTGGAATTCTGATGATAATTTTGATGGCAATAGCATTTACACTTGCAACCAAATGGTTCAGGA GAAATATTATTAAGCTACCTAAACCATTTAGTAGGCTCACTGGTTTCAATGCCTTCTGGTATTCACACCATCTGTTTATCATTGTCTATGTCCTGCTCGT CGTCCACGGTGTAAAGCTTTACCTGGTGCACAAATGGTACCTTCAAACGACATGGATGTATCTTGCGGTTCCAGTTTTGCTTTATGTAGCAGAAAGAACG CTCAGATTCTTTCGTTCTGGTTTCTATACAGTACATCTTATAAAGGTGAGTAGGGAAAGTGAAACTATCGACACTTGGCCCTTACAACGGTTTTCAACGT CATTATAAATATGGCTTTATTACTACTGTTTAAGTGTTTTGTATACAATTTGCCTTGGCTATTGGTGTGCAACAAAGTAGAAGGGTCTCAAAAAGTGAAA ACTGAGAGGACCAAGGACTTCATGTCGCAGTCTATTACTTATTCTTATAATTAACCAATCTTGTAAAATGAACTTACGTTAACATTTTATTTTTCTCCTT ATTGTGCAAAACATTTAGGTTGCCATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGTTACAAGAGTGGACAATACATGT TT
• Tissue: pods
• Gene name: LI_gene_162589;
• Additional information: details;

Expression of Ll_transcript_368837

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368837

• Blastp: Respiratory burst oxidase homolog protein A from Solanum with 73.97% of identity
• Blastx: Respiratory burst oxidase homolog protein A from Solanum with 73.2% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (102579392)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446559.1)
• Pfam: Respiratory burst NADPH oxidase (PF08414.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;