| Id Trinity | TRINITY_DN48613_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_368827 |
| Sequence | ATTTTCTGACCCACCACACTCCCTTTCTATCTCTACCACTTCCTCTATAAGCCAAGCCACTCAAACCGTGTCATCCCACACACAATAGACAAAGCTCAAT AACAACACCTCCTAGTGCTCACACCTTTTTCTCTTTCACCCTTTTCCTTTTTTCTTTTTCCACAACTACATTTAGCTAGGGAATCCCACCCCACTTTTAT TAAACCTAACAACCATACTTAAAATATAATAACCATTATTATATATATCTTACTTAATCCCATTCCATTCCATAAATCTTTGTTCTTCTCCAATTCTAAC TAACATAGGTCCCCATTATCAATTACTAGTAATACTCCCTTGGCTTCATTTGATCTTTGCTACAAAAGCAAAACAACTCCATTTTCTCTTTTCACACTTA ATTATCTTTCCTCTCATTTCCTCTTCTCAGAAAACTTTCCACGCGTTCAAGTTTTTATCCCTTAGATGCTGAACGCGTTCAATTTAATCCAAATTCTAAT CTTAATTACTTCTTCAACCACCATCAGTGCACGTTAACGGCGTACGCCAAATCACACTATATAACAAAATTTCATTCCCTTTAGTTTAAAAAAGTTAAAG GGAGAGAAGCATTGCATTCTTTCGTTCTGGTTTTGTGTGATAATAAGATATGAATGGTGTTCCGAAACATGAGCGGCGGTGGGCGTCGGACACTGTTCCC GGAAAAGTAACCGTCAGCACTGAAACTTCGCCGGGAGCAGAGTCCTTCTCCACTGCGGAGGAGTTTGTGGAGGTGACACTCGATCTTCAAGATGACGACA CTATTGTTCTTCGTAGCGTTGAGCCAGCCTCCGTTGTTGACATCGCCGACGATGCTGTCGCCGGGAGTAGCGGTTATAATACTCCGGCGTCGGTTCCGAG TACTCCGTCGATTCGGAGGACCTCGTCCCGAGGTTTCCGGCATTTCTCGCAGGAGCTGAAGGCGGAGGCGGTTGCCAAGGCCAGGCACTTCTCGCAGGAA CTCAAGGCGGAGCTACGGCGGTTCTCGTGGAGCCATGGCAACACATCACGTGCTCATTCAACTTCTACGGCCGGAGGTGGTGGTGGTGGCGCAGGAGCTG GATTTGAGACGGCGTTGGCAGCGAGAGCTCTGAGGAAACAACGTGCTCAGCTAGATCGAACTCGCGCCGGTGCTGTGAAAGCGCTTCGTGGTCTCAGATT CATCAGTAAGAAATCAAACGGCGTTGATGCGTGGAACGAAGTACGGAGTAACTTCGATAAGCTTTCTAAAGACGGTTATCTCTATCGCGCTGATTTCGCT CAATGCATAGGGATGAGAGATTCTGCAGAATTCGCTCTGGAATTATTCGATTCTCTGAGTCGTAAACGAAGAATGAGAATCGACAAGATTAGTAGGGATG AACTTTTCGAATTCTGGTCCCAAATCACCGATCAAAGTTTTGACTCACGGCTACAGATCTTCTTCGACATGTAATCATTGAGTGATTAATTGTTGTTGTT GAAGTTTAATTTAATTAATCAATGTTAATTAGTAATCTTCCACGGTTTTCTTTCCTTCCTTTTAATTAAAGAATAAACAAGTACATATTGTTAAATGCCA CCGAATATTTGCATTAAAGTTTTAAATATACCCTGTCATAGCTTTCTTTGATTGGAACTCAATTATCATCATTACGTTACTTAAATATTTTTAAAATCAA TCTTAATCATGTTGACAGGGTGGACAAGAATGAAGATGGGAGAATAATGGAAGAAGAAGTAAAAGAGATTATCATGTTAAGCGCTTCAGCAAATAAATTG TCCAGGCTGAAGGAGCAGGCGGAAGAATATGCAGCTCTGATCATGGAAGAGTTAGACCCGGAAAGACTTGGTTACATTGAGGTGGGAAATATATTCAATT ATATTCTGACTTTTGTTTTGGACACATTAATTCCACATTTTACTACTGTCATGATAAATAGCCTTAGCATATCTAAGGTTTTGGTACTTGGTAGAAATTA TTGCTTTATACACCATAGGACAACCACAAAAGAAATAAGGAAGTATTATCCCCCAATGTTCCATTGGTGAAATTGTTAAGCCGTAATAATTTGGTTTCCG GAAGTCATTGTTGGACTAGGAGCACAATAGCAACTGTACTGTTGAGTTGGACCAAATTATATGATTTGCCAAATCCCACACGACATTTCCAACGTTGTTC AACCGTGCAGAGAAAGAAGAAAGACAAACTAAGCATGATAAAATATTAAAAACTGCGTGAACATATAAATGATTTGTTGTGATAGCAACGTCATTCATTA TTAATTTGTAATAGCTTCTCAAATATAAAATCTTATTTCTTAATCCTTTGTTTTGTCAACAAATGTACATAAATATTACCTAGAGAACCTGTCTTATTAT GTACTCCTTACCTAATATGATTAGGATGCTATCTGGAATCATTCAGTTTCTTGGTATCAGTGGCATGGGTTAATACTCCTATATTATATATATTTTTAGT GTCTTAACTTTTTTCTATATTATTTCAAACAGTTTTGATGTTTTAGAAATTTATTATACATTTATACTTTGTTTTTAAATTATATATTTATTTATTATCT ATTTTCACTCTTTATCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_162589; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368827
| Blastp | Respiratory burst oxidase homolog protein F from Arabidopsis with 62.22% of identity |
|---|---|
| Blastx | Respiratory burst oxidase homolog protein A from Solanum with 62.28% of identity |
| Eggnog | NADPH Oxidase(ENOG410XNZY) |
| Kegg | Link to kegg annotations (AT1G64060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446559.1) |
| Pfam | Respiratory burst NADPH oxidase (PF08414.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |