Ll_transcript_369165

• Id Trinity: TRINITY_DN48619_c2_g1_i3
• Name Transcript: Ll_transcript_369165
• Sequence: CCTAATTGGGTTATGGGCTGACCCATTATAAGGTGAGGGAAGGAGCAATTTCTGAATCGTGTTTATCAAAACAAACCCTAGAACTAGAACCAGAGAGAGA GAGAGAGAGAAAGAGATTTTGATCGAGAAGATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATATTGAAAGCGGCTGTTATGA AATATGGCAAAAATCAATGGGCTCGAATCTCTTCCCTTCTCGTTCGTAAATCTGCTAAACAATGTAAAGCTCGCTGGTACGAGTGGCTCGATCCTTCCAT CAAAAAGACCGAGTGGACAAGAGATGAGGATGAGAAACTGCTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACCATTGCTCCCATTGTTGGCCGT ACACCATCCCAGTGCCTTGAGCGTTACGAGAAACTCCTTGATGCAGCTTGTGTTAAAGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGTC CAGGGGAGATTGATCCAAACCCTGAGTCGAAGCCTGCAAGACCGGACCCCGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCGGAAGCACGAGCTCG GTTAGCCAACACGAAAGGAAAGAAGGCGAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTGCAGAAAAAGAGAGAGCTG AAGGCTGCTGGAATTGATATCAGGCAGCGTAGGAGGAAAAGGAAAGGAATAGATTATAATGCGGAAATCCCATTTGAGAAGAGACCTCCTCCGGGGTTTT TTGACGTTGCTGATGAGGATAGACCAGTTGAGCAACCTAAGTTCCCTACTACAATTGAGGAACTTGAGGGAAAAAGAAGGATTGATGTTGAAGCACAATT AAGGAAGCAAGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCTATTTTGCATGCCAACAAGATGAATGACCCTGAAACGGTTAGG AAGAAATCAAAACTGATGCTTCCGCCACCCCAGATATCTGACCATGAATTGGATGAAATTGCGAAGTTGGGATATGCAAGTGACCAAGCAGGGATAGAGG AACTCGGAGAAGGTAGTAGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCCAGCCAAGGAATGACTCCCTTAAGAACCCCTCAGAGAACACC GGCTGGTAAAGGAGATGCTATCATGATGGAAGCGGAGAATCTGGCTAGGTTGAGGGAGTCCCAGACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCAT CCTTCAGATTTTTCTGGGGTCACTCCTAAGAGAAAGGAAATTCAGACTCCGAACCCGGTGCTGACTCCCTCTGCAACTCCTGGAGGGACACCAAGCCTTA CTCCTAGAAGTGGTATGACACCAGCAAGGGATGGATTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGACGAGCTACATATCAATGAGGACAT GGATATTCATGATAGCGCTAAGCTTGAGCTACAGAGACAAGCTGATTTGAGAAGAAGTTTGCGCTCTAGTTTAAGCAGCATTCCACAGCCCACGAATGAG TACCAGGTGGTGATGCAACCGGTTCCAGAAGATACTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAGTAGCTAGAGAAAAGGCAGAAG AAGAGGCACGGCTGCAAGCACTGCTTCGAAAACGATCAAAAGTCCTTCAAAGGGGACTTCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAAAAGTTC CTTGATGAGAGCTGATGAGGACAAGAGTTCCTTTGTCCCACCAACCTCAGTTGAGCAAGCTGATGAGCTGATAAGAAAGGAGCTTCTAACCTTACTGGAG CATGACAATGCTAAGTATCCTCTTGATGAGAGTAAGGAGAAAAAGAAAGGAGCCAAGCGTTCAGCAGCCAGGCCTGCTGTCCCTGTTATAGAAGATTTTG AGGAAGAGGATATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCCCAGTACCTTCGTGTGGCTATGGGGCATGAGAGTGAATCCCTTGATGAATTTCT TGAAGCACATATAACTTGCGTTAATGATCTTATGTACTTTTCCACCCGTAATGCCTATGGTCTATCCAGTGTTGCTGGAAACATGGAGAAGCTAGCGGCT TTGCAGAATGAATTTGAGAATGTGAGAAGTAAGTTGGATGATGGTAAGGAGAAGATAGTACGCATTGAGAAGAAGGCGATGGTACTCACGCAAGGTTATG AGACGAGGGCAAAGAAAAGTCTTTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGATGTAGCGGCAACAGAATTGGAGTGCTTTCAAGCTTTACAAAA GCAAGAGCAATTAGCAGCATCACACAGGATAAACAATGTATGGGGTGAAGTACAAAAGCAAAAAGAACTTGAGAAAACTCTACAAAAGAGATATGGAGAT CTTATAGCAGAGCTTGAAAGGGTACAAAATATTGTGAACCACTACAGGGTACAAGCACAAGAAGAAATTGAAGCAAATAATCACAAACTTGAGGCTATTG AGAATACAGGTGATGAAACTAATGTTCAGGGTACTCAGAATGGAAGTGCTGTATTAGTTGATCCATCTGACACTGGAACTACTGGCCAACAAGCAGACAT TGTGCAAGATCAAGCTACTTGTACCTTAAAAAGTGATGTTATGGATGTGAATTCTGGTAAAGAGCAAACAGCACCTGACACTGATCTTAAATTGACAGAT AAACCGATTGTGGAGGATGACATTGCAAATGTGGTAGAAAGTAACAAACCTAGTGTTGACGAAGAGACCACAGTAGATATGAGTGTTGCAGTTGAAGTAA GTAGTATTGAGGGAAATAAGGAGGATAGAGATGTTGAGAATCTAGATGATGCTGTGGAAGATGTGAACCAAGGTGATAACTAGCATAAGAGAAACTGTCA GGAAGTTCTGATATATATTTTGGGGAGGCATGTTAGATTGAAGACCTGTTGCTCTATCCTGATTAATGAGTTCAATGCATCATTAATTAAATGAATTGCA TGGAGAGAATGAATCTAGTTTATTGGACAGTCAGAAACTGAAGTTTGTAATGTGTATGATCAAGTTGAGATGGTTTTCTATTTTTGTCAATTGCTGTCTT TACTTTTCACCAAGTGGATGTTGTGTTCTTATGCATGTTCTATAAAGAACATAGGATTTTGTCAATGAATTAGATTTGGATGCACCATGCCTTCTATAAA ACTTATTTTAGATCCCCTTTATAGCATTTTGTCCTCTGCAGATTGTTGAGCTATTTTCAGTTTGAGATTATGCTTTAAGGTTGTATGCCATATGAATGTT AACAACATGAATGTTAAGTCAAAA
• Tissue: pods
• Gene name: LI_gene_162648;
• Additional information: details;

Expression of Ll_transcript_369165

FPKM

• PAB: 2.2
• PNAB: 25.3
• PS1: 27.9
• PS2: 23.7
• PS3: 26.2
• PW1: 21.6
• PW2: 18.6
• PW3: 15.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369165

• Blastp: Cell division cycle 5-like protein from Arabidopsis with 74.5% of identity
• Blastx: Cell division cycle 5-like protein from Arabidopsis with 74.35% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT1G09770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418954.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;