Ll_transcript_369220

• Id Trinity: TRINITY_DN48624_c3_g2_i2
• Name Transcript: Ll_transcript_369220
• Sequence: AGAAGTGAATATTATTTCCCTAGTAAGGCGAATTTCATTCTCACTTACTATCGCCGCCGTGCCCTTAATCATGGCCACCGCCACCAACCCACAACCACCA CCACTGCCGCTGCAAGCACTGAACTTAGAGTCTCTTTCCGGCATAGACTCAACAACTCTGTCACAGTCTGAAATCCAAGCCCTCTCTCTCTGTTCTCTCT CCACCTTCGATCTTCGCTCTACGCGTCACCTCGTCACTCCCACAATCGATCCTTCCTTCTTCAACGAGAGCTCCGGTTCCCACCGACAAACCTACTCCCG CCGCCGCCGCCTCCCCGCCACCAACGACGTCGTCACCGACAGCAACATCGATAACCGCAGAATCATCGACTATTTAAAGCAGTTGATCAGGGAAGACCCG AAGTTCGATCAAATCGAGCTTCTGCAACCTTGTGTCCACACAGAGGTTGTTGCTCCGGTTAGAGATCTGAGAGTGGGAACGGAGTTAGGGTTAGTGAGGA AGAGGAAGAGAGGGAGGAAGCCGAAAGTGAAGGTCAATTTGGATGAGTGTTACAGAGAGATACGGATTGTGAATAAGAATGGTGTTGCTATTGATTTTTC GGCTTTGGCGGTTGCGGAGGATCCGTATGCGGAGGAGTTGAGGAGAAGGACTGAGGGGTTGAAGAGTGAGGAGGAGCTGTTAGGGTTTTTGAGGGATTTG GAGGGGCAATGGGGAAGTACGAGGAAGAAGAGGAAGATTGTTGATGCTGCGAGTTTCGGCGATGTCTTGCCACGTGGTTGGAAGCTTTTGCTTGGGTTGA AGAGGAAGGGTGGCCGCGCTTGGATCTATTGCCGCAGATACTTGAGCCCTAGTGGACAGCAATTCCTGTCTTGCAAAGAAGTTTCTTCATATTTGCAGTC TCTTTCCGGCCATAGTGACACACAGTTACAAATCAGTCTTAGGAGTGAAAATATGCTGCAGGAACATACACACATGGTGACTACTGAAAACTATGCAGGT TTTACCCTTGAGGATGAAAATCAACTGCAGATTGTTGTAGCTAACTCAGATGTGCCCTGTTTATCTGTTTCTAATGAACGATCGAAAGAAGTGGCCTTAT TGGGGTTTGACAATCTTGCAGATGTGCAAATACATGACCTATTTGAATGTCATAAATGCAACTTGAGCTTTGATGAGAAGGATACATACTTGCAGCACTT ATTGTCTGTTCACCAGAGGACAACAAGGCGTTACCGACTTGGTTCTTCTGTCGGAGATGGAGTTATCATTAAAGATGGAAAGTTTGAGTGCCAGTTCTGC CATAAGGTGTTTCAGGAAAGGCGTCGCTACAACGGTCACGTGGGGATCCATGTTAGGAATTATGTGAGGAAAGTTGAAGATTCACCAGGTCTGGTAAATG TCCAAAGGAGTGACAATTCTCCAGTCCGGGAGGACAGACATTCAAGGATCTCTAAGATGGATGCTCTTATTGAAATTGCTCAAAACTCTATCATGGAACC CCATGTTTCATCTGAACTTAGTTTAATAATTCCTGATTTGGAAATTTCTGTTGACAACTTAGATCAAGACATTAACATGGAATCTCCTAATGGTGAACAG CGAATGAAATATTGCCTGACTGGCAAAAATGTGGTTCAAGATTTAAATCAACAAGATTATCCTGATCTACTTGGGGAAGGGGAAGTAGAGGAAATTGATG TTGACAACCAGGTTATAGATGCAAAGATGGTTACTTGTCTAGATAACACGGGTTTGTTTTCTGTAAACGAGCAAAATGTGAATGCATCTGATATTTTTAT GGGAAAGGATGATTTAGAATTGACTGTTGAGGAGTTCGATCAGTATGGGAGTGATTTGGAAAGAGTTTCTCAAAGCCCTTTATTTCATTTATCTGGCAAT CACATGATACCTGAATCTGAGAAAAATGAAAACTCTGGCTGCACTAATGCCAAGTGGCAGTTTAAGCTTGATGGAGACAGTAGGAACAAGAGTGAGTTGA ATATTGGTTTAGATGGCTGCATGGATGTACCGGTTAGCATTAATGTTCAATCGACAATGATGCCAGCTTCTTTAGAAAATGCGTTGCACTCAAGGGATTC TAAGCAATCTATATCCACAAAGCAATATTTGGATGAAATAGGCCTCCAGTACAATTTTGTAAGTGGTCAAAATTCTCTTTCTCTGCTTGATGTGACTACT GAGTTGGCAAACGACACAGTGATGGAAGGGATGCATTCATCCCCAGTTAATTTTGAATCACAAGAAGTTACGATAAATATGGGTGGAAGAAATCAGCTTA CGGCTGTGTGCGTGTGGTGTGGAATAGACTTTACCCATGATGCTGTTGATTCTGAAATACAACCAGGTTCTGTTGGATTCATGTGTCCAGCATGTAAGGG AAAGATCTCTGGTGAAATCAATGTGTTGGATAGTGGAACTGGTAATTGCTGATACTCTATATATTAATGGTTTGATTCATGTGTCCCAAGTGCAGTGAGT AGTAAGCAAGCATAATTGCATATCATTTTTGGTTCTATGGTAACTTCAAAGTAAGATTTTTGACTTTGGCAGGTGAATGATATTTTTGAAGGATATCAGG TATGGGAGTTGGTGGTGTAGATTGAATGATGGTGGTATTATCTCAAGTGATTCTGTTTATTTGTAAGATAACCAATATTGTGATGTAATATTACTGTCTA GTGTGTGTATTCCATGATTACACGTGATTTAGTATAGTAGTAACAACACATAAACCACAATCTATGTGCAAATTCTATTGATCTATATCGAATGAGTTAG ATGAAAA
• Tissue: pods
• Gene name: LI_gene_162713;
• Additional information: details;

Expression of Ll_transcript_369220

FPKM

• PAB: 4.5
• PNAB: 6.6
• PS1: 7.3
• PS2: 8
• PS3: 7.2
• PW1: 6.5
• PW2: 6.5
• PW3: 8.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369220

• Blastp: Methyl-CpG-binding domain-containing protein 8 from Arabidopsis with 45.11% of identity
• Blastx: Methyl-CpG-binding domain-containing protein 8 from Arabidopsis with 47.97% of identity
• Eggnog: binding domain) protein(ENOG410XW64)
• Kegg: Link to kegg annotations (AT1G22310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440347.1)
• Pfam: Methyl-CpG binding domain (PF01429.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;