| Id Trinity | TRINITY_DN48628_c6_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_367820 |
| Sequence | GCAGCTCCCATCTCTTTACAAGAAGAACCTTTACCTGTTATACCTCCTCGTCTCATGGTTAAAACCGACTCCTTGAAATACCCTGCCGGTTACATCGGGG CGTTTCCCAACCCTTCCAGCTCCGGAAATGACAACAATGATCACATTGCGATGAGTTATGTGAGAAATATACTATCTTCCAAGGTTTATGATGTAGCTGT TGAGTCACCACTTGAATTGGCGCCAAAACTATCTAAGAGGTTGGGTGTTAATGTTTGGCTCAAGAGGGAGGATTTGCAACCTGTTTTCTCATTTAAGATC CGTGGAGCTTATCATATGATGGCAAACCTTCCAAGGGAACAATTGGAAAAAGGGGTTATATGTTCATCAGCTGGAAATCATGCTCAAGCAGTTGCATTGT CTGCAAAGAAACTAAATTGCACTGCTGTGGTTGTTATGCCTGTTACCACCCCAGACATAAAGTGGAAATCTGTAGAGAGTTTGGGTGCTACAGTTGTACT TCTTGGGGATTCATATGAAGAATCACAAACATATGCTAAAAAACGTGCAATAACGGATGGTCTTACATTTGTACCTGGTTTCGATCACCCAGATATTATC ATAGGTCAAGGAACAGTGGGGATGGAAATTGTGCGCCAAATGAAAGAACCTCTGCATGCAATTTTTGTGCCCATAGGAGGTGGTGGTCTCATTTCTGGTA TTGCTGCTTATGTAAAGATGATTAGTCCACAGGTGAAGGTTTTTGGGGTTGAGCCCACTGATGCAAATACGATGGCATTGTCATTTCATCATGGTGAGAG AGTGATTTTGGATCAGGTTGGAGGATTTGCAGAAGGTGTAGCTATTAAAGAGGTCGGTGAAGAAAATTTTCGCATATGCATGGAGCATGTTGATGGAATT GTTCTTGTAAACCGTGACTCACTTTGTGCTTCAATTAAGGACATGTTTGAGGAGAATAGGGGCATATTGGAACCATCAGGAGCACTTGCCCTTGCTGGAG CTGAGGCATATTGCAAGTATTATGGGGTGAAAGGGGAAAATGTTGTAGCAATAACGACTGGGGCCAACATGAACTTTGATAAACTTAGAATGGTAACTGA ACTTGCTGATGTTGGTCGTAGAAAAGAGGCTCTATTTGCTACTATTTTGTCAGAAGAGGCTGGCAGTTTCAAACAATTTTGTCAATTGCTGGGGCAGCAC ATAAATATCACAGAACTCAAGTATAGATATAATAACAAAGAGAAGGCTGTTCTACTTTACAGTGTTGGTGTAGATGAAGACTCAGAACTAAAGGCAATGG AAGAGAAAATGGAATTATCTGAGCTTCCAACTTCTAATCTGACAGAAAGTGAGTTGGTGAAAGATCATTTGCGTTACCTGATGGGAGGACAAGCAAATAT TGAGAATGAGGTTGTTTGCCGTTTTATATTTCCAGAAAGACCTGGTGCTCTCATGAATTTTTTGGACTGCTTTAGTCCCAGATGGAGTATCACTTTATTC CATTATCGTGGCAAGGGTGAAATGGGAGCAAATGTATTGGTTGGAATGCATGTACCACAGAATGAGATGGATGAATTCCGTGATCGTGCTAACAAACTTG GATATGATTATACAGTGGTGAACGATGATCATGCTTTCCAGCTTTTAGCGCAGAAATGATTTTTGCTACTAGCCAAATATTCATTTCAACATAGAACTGA ACTAGATTACCTTTCTAGGAAATAATAAATATTATTTTACGAATATATTATAATCTTCGAGGCATTCCTAACAATACCCAAAATTTGATCTTAAGACTCA GCTATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_162749; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367820
| Blastp | Threonine dehydratase biosynthetic, chloroplastic from Arabidopsis with 70.38% of identity |
|---|---|
| Blastx | Threonine dehydratase biosynthetic, chloroplastic from Arabidopsis with 70.61% of identity |
| Eggnog | Threonine dehydratase(COG1171) |
| Kegg | Link to kegg annotations (AT3G10050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447178.1) |
| Pfam | Pyridoxal-phosphate dependent enzyme (PF00291.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |