Ll_transcript_369684

• Id Trinity: TRINITY_DN48629_c3_g4_i2
• Name Transcript: Ll_transcript_369684
• Sequence: TCTAAATTCCGTAATCTCGGCTCAGATTTATTGTTCTCACAGTTTTATCGTCTTTCCTGTACTATGGCGAGCAAGCGTAAAACTAGATCCTCTTCCGGCG TGGCTTCGGCTTCTTCCCTGGACTCGAGTTCTGTTCAGACCTCGAGTAAGTTGAGGAAGAAGACGAATCTGAAAGGTCCTGCAGCTAAGGAAGTTGTGAA AGAGGAAGAGAAACCTTGTGTTTCGGTTTTAGTTGCTGGTGGTAATGGAAATGATGGCGAAGAACAATCTTCTGCTAGATTCCTTGGAGATCCGATTCTA GATGAAGAAGCTAGACAACGCTGGCCAAAACGATATCAGGAGAAGAAGAAACAGCCCTCGAGGTCAAAATCAAACAGTGATGATGACGAGATTCTCCAAG CCCGGGGTCACTACACAAAAGCAGAAGTAGATGGGTTTCTTCTTTTTAAGCTTTATGATGATGCCCATGTCAAAGCAGGGGAAGGGGAGGATAACTATAT TTGTAAAATTGTTGAAATGTTTGAGGCAGTTGATGGGTCATTGTATTTCACAGCACAATGGTATTATAGGGCAAAAGACACTGTCATCAAAAACCTCGAC CATCTTATTGAACCAAATCGAGTTTTCTTTTCAGAAATTCAGGACGACAACCCATTGGAATGTCTTGTTGAAAAGCTAAACATTTATAGATTGCCATTAA ATGTTGATTTGGAGGCAAAAAAGGAAACGATTCCAACTTGCAATTACTATTGTGATGCACTATATCTTTTGCCATATTCTACCTTTATTAACTTACCTCC AGAAAGCAAGGAAACAGTTAGTGAAACATCATCAACCATATCATCTGAGGTTGATGCAAGTGGAAGATCAGAGGTCAACTCGCAACACTGTGAAAAATTG CACCACAAAGAAGATAAAAAACCAGAGTTTAGATTACTAGATTTATATTCTGGTTGTGGAGCAATGTCAACTGGTTTGTGCCTTGGTGCAAATTTGTCTG GTGTTAATCTTGTTACAAAATGGGCAGTGGACTTGAATCAACATGCTTGTGAAAGTCTGAAATTAAATCATCCCGAAACAGAGGTTAGAAATGAAACAGC AGAAAACTTCCTCTCATTACTGAAGGAATGGGAGAAGCTATGCAGTTACTTCTCTTTGGTCAATTACACAGTGCCACACGAGCAGTTTGTGAATCTTTTT AAGGTTGATGAGGATGATGATAATGGTGCTGAAGAAGAGAATGATGACAATGATGATGAAGAAGTGTTTGAAGTTTCAGAAGTTCTTTCTGTATGCTATG GTGATCCAATTGGGAAAAAAGAACAAGGGTTACACTTTAAGGTTAGTTGGAAGGGTTATGGATCTGATGCGGACTCTTGGGAGCCAATTGAAGGTCTAAG CAATTGCAAGGAAAAGATAAAGGACTTTGTCACTCGCGGCTTCAAGTCAAAGGTCTTGCCCTTGCCGGGAAATGTTGATGTAATATGTGGAGGGCCTCCT TGTCAAGGTGTTAGTGGTTTTAATCGATTTCGGAACAAAGAGAACCCATTAGAGGATGAGAAGAATAAACAACTGGTTGTATACATGGATATTGTTCAAT ACCTGCAGCCTAAATTTGCGTTGATGGAAAATGTGGTTGACATTGTCAAGTTTGCCAATGGTTTTCTTGGGAGATATGCCTTGGGCCGTCTTCTTCAAAT GAACTACCAAACTCGCCTTGGAATTATGGCTGCTGGAGCTTATGGACTTCCTCAGTTTCGTTTGCGTGTTTTTATATGGGGCGCCCAACCTTCTGAGAGG TTGCCTCAATTTCCGCTTCCAACTCATGATGTGATTGTAAGGGGTGTTATCCCTTGTGAGTTTGAGATATGCACAGTTGCATACAATGAGGGACATGGTG TTCAATTGCAAAAGAAACTTTTACTTGAAGATGCTATTTCTGACCTTCCTCCGGTTGAGAACAATGAACGTCGTGATGAGATACCTTATGACAAACTTCC CCAGACAGAGTTTCAGCAACTAATTAGATTAAGCAAAAGTGAAATGTTGAACTTTTCAGCTGGATCCAAATCTTCAAGGACTCAACTTTATGATCATCGT CCACTTGAATTAAATGCAGATGATTATCAACGTGTGTGTCGCATCCCTAAAAAGAAGGGTGGATGCTTCAGAGATTTACCTGGTGTTCGTGTGCGGCCTG ACAAAAGGGTTGAATGGGACCCAGATGTGAAACGTGTATATTTGGATTCAGGAAAACCATTGGTTCCGGATTATGCCATGTCATTTGTGAATGGAACATC ATCGAAACCTTTTGCTCGGTTATGGTGGGATGAAACTGTTCCAACAGTCGTTACTAGAGCAGAACCTCACAATCAGGCAATCATGCACCCTGAACAAGAT AGAGTATTGACTATTCGAGAGAATGCAAGACTTCAAGGATTTCCAGACTACTACAAGCTGTGTGGTCCTGTCAAAGCAAGGTACATCCAAGTTGGGAATG CTGTTGCAGTCCCAGTTGCTCGAGCTCTGGGATATACTCTTGGCCTTTCATTTCAAGGACCTGTTGCTGCTGCTGCTGCTGCTGTGGCTGATGGGCCATT GTATAAATTACCTGAAAAGTTCCCCATTCTTACAGAACGAGTTTCTTCTGTATCATCTGAAGATATTGCTTGACTTTCGGAAGCATTGTTTTTCAGCAGA GCTTTGAATAATGATTTTTACCTACTCAACACAGAACTGCAATTAGAAACATTGCTATGGACTATCCTATTTATTGTTATATGTAGCATGTAATACAATG TATTTCCCTTTGTGGGTCATATTTATCATTAATTAATGAATATCAAAGTTCTTGTTATAATGTTGTGATATACTTTGTGCAATAATAAATTTTATCTTCT TTTGGC
• Tissue: pods
• Gene name: LI_gene_162763;
• Additional information: details;

Expression of Ll_transcript_369684

FPKM

• PAB: 0.1
• PNAB: 39.9
• PS1: 21.8
• PS2: 6.3
• PS3: 10.7
• PW1: 11.1
• PW2: 4.9
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369684

• Blastp: DNA (cytosine-5)-methyltransferase CMT3 from Arabidopsis with 56.65% of identity
• Blastx: DNA (cytosine-5)-methyltransferase CMT3 from Arabidopsis with 57.05% of identity
• Eggnog: Cytosine-specific methyltransferase(COG0270)
• Kegg: Link to kegg annotations (AT1G69770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448358.1)
• Pfam: BAH domain (PF01426.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;