Ll_transcript_369688

• Id Trinity: TRINITY_DN48629_c3_g4_i3
• Name Transcript: Ll_transcript_369688
• Sequence: GTGGCTTTTATATAATGTCTTAAGTTTAATGCTCATGATTATTCAATTCAATTAGGGTGGATGCTTCAGAGATTTACCTGGTGTTCGTGTGCGGCCTGAC AAAAGGGTTGAATGGGACCCAGATGTGAAACGTGTATATTTGGATTCAGGAAAACCATTGGTAATAATAAAACGTTTTTATTAGCTTACAATCTGCCACC CCATATCTTTTTTAACTGAACTTATCTGTATTATTGATTTCATAATATGTCGCTTCAATTGTTATCACAGGTTCCGGATTATGCCATGTCATTTGTGAAT GGAACATCATCGAAACCTTTTGCTCGGTTATGGTGGGATGAAACTGTTCCAACAGTCGTTACTAGAGCAGAACCTCACAATCAGGCAATCATGCACCCTG AACAAGATAGAGTATTGACTATTCGAGAGAATGCAAGACTTCAAGGATTTCCAGACTACTACAAGCTGTGTGGTCCTGTCAAAGCAAGGTACATCCAAGT TGGGAATGCTGTTGCAGTCCCAGTTGCTCGAGCTCTGGGATATACTCTTGGCCTTTCATTTCAAGGACCTGTTGCTGCTGCTGCTGCTGCTGTGGCTGAT GGGCCATTGTATAAATTACCTGAAAAGTTCCCCATTCTTACAGAACGAGTTTCTTCTGTATCATCTGAAGATATTGCTTGACTTTCGGAAGCATTGTTTT TCAGCAGAGCTTTGAATAATGATTTTTACCTACTCAACACAGAACTGCAATTAGAAACATTGCTATGGACTATCCTATTTATTGTTATATGTAGCATGTA ATACAATGTATTTCCCTTTGTGGGTCATATTTATCATTAATTAATGAATATCAAAGTTCTTGTTATAATGTTGTGATATACTTTGTGCAATAATAAATTT TATCTTCTTTTGGC
• Tissue: pods
• Gene name: LI_gene_162763;
• Additional information: details;

Expression of Ll_transcript_369688

FPKM

• PAB: 0
• PNAB: 1.5
• PS1: 0.6
• PS2: 0.2
• PS3: 0.2
• PW1: 0.4
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369688

• Blastp: DNA (cytosine-5)-methyltransferase CMT1 from Oryza sativa with 72.5% of identity
• Blastx: DNA (cytosine-5)-methyltransferase CMT3 from Oryza sativa with 70.83% of identity
• Eggnog: Cytosine-specific methyltransferase(COG0270)
• Kegg: Link to kegg annotations (4332128)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448358.1)
• Pfam: C-5 cytosine-specific DNA methylase (PF00145.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;