Id Trinity | TRINITY_DN48635_c3_g3_i6 |
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Name Transcript | Ll_transcript_368452 |
Sequence | CTCAGTACATATCCCATGAGACTCTATCTTTCTGTCCCTCTCAATTTGCTTTTCAAAGGTATCCCTATGTTACAATTGCACACTTCAACATACTATGTCC CATTAAGTTACTCATTGCTACTTGCTAGGTAGAGTAAAAAAGAAGATACATTTGAGATGGATATGAGTAAAAGAAGAGTTGGGGTAAGAGGGAGTGTGGT TGCAGCAGGTTCAGTTTGGGAGAGTAGGATGAAGAGTGATGAAGTTGGAGGTGGAGTTAAGGTTTTCAATGGAGAAGGAAATGCTGAAGAAGGAGGTAAT AAGTTGAAAAGAAACCAACTTGGTGTTGTAGTTGGCAATGGAAGGAGAAAAACTTGGAATTCAGAGAGCCCTGAAGGGTTAGAAAAGAGCCCAATTCAGA TAGCTAGAGGGAAAACAGAACCACAGAAGAATTGTGGGGAACAGTGTAAGGATCTAAGAGTTTCTTCAAGTGGAAGCAAGAAGAGTCCAATTCAGGTGAG GAAGTTTAAGATTGAAGGAAGCAAGGATTTTGGTGATTCTGCTGATAAATTTGAAAGAAGTCCAATTCAAACCAGAAAGGTAAGATCTCAAGTGAAGAAT GGGACATTAGAACTGAAAAAGAGAAAATCAGATTCGATTAAAAGTGCAAGTGATGGAAATGGGGAAAGTTCATTCCAATTGAGAAAGACTAAATCAGAAT TGGATAATGGAATTGATGGATCATCAAATGATGGGTGTAAAAATATTGTAACTGGGAATGAGAAGAGTGATGGTAATGAAAATTGCAAGGATTTTGGTGT GTGCCAAAAGGAGGTTATTTCGAGCAGTTCGGACAATACGGAATTGGTTGCTGGCGATTCAGATGAATTTATTGATGATGAAGCAGATGAAGGAAAAGAA GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATTGATATTGAGGTGGAGAAAAGGAGCTTAGAAGTTAAGGAAATTAGCAAACCAGAATCGAAGTTTG TGAATAAGCCAGAAAAGGAAGAACCAGAAAAACAGAAGGTTGTGAATGAACCAGAGTCAAGAAAGGTTGTGAGTATCAGCAGAAAATTTCAACAAAAAAT TGAAACACCACTCTCTGCCCCTCTTACTGTGAAGCAATCCCCTCAAATTAGAAAGCATTCGACAATTTACCAAAATTTCTCTAAACCAAAATCAATTCCA AAGACAGAACAATACCATAGCTTCCCACAAACACAGAACAAATTGCAGAGTCTAGTGGATTTAATCATGTGGAGAGATATCTCAAGATCAGCATTTGTCT TTGGAAGTGGAACATTCCTTATAACTTCATCTTCTTATGCAAAGGATATTAATCTAAGTGTTATTTCAGTAATGTCCTATATGAGCCTTGTCTACCTAGC TTTTATCTTCCTCTACAGATCCCTAATTTGCAGGTAATTACCCCAGTAGATAGTGAACAATAAATGATGTAAAATTATTAACAGAGTAAGCTCTAATTTA TTTTGTTTGGTATGAAATTAATCAGAGGGGTCATAGATGTAGAGGACACAAATTATGTAGTGGGAGAAGAAGAAGCAATATGGGTGCTTAAGTTGATCCT TCCTTACTTGAATGAGTTCCTATCAAAACTAAGAGCCATGTTTTCTGGAGATCCTGTTACCACAATCAAGTTAGCAGTTTTGCTCTTTGTTTTAGCCAGA TGTGGCAGCTCAATAACCATTTGGAAGATGGCCAAATTAGGATTCTTTGGAGTTTTTACCGTGCCAAAAATCTACTCTTCTTGTTCTGCACAATTAACTG GATACGCAAATTTTTGGATCCGTCGATTGCGGGATGCTTGGAATTCATGCTCCCACAAAAAGGTTGTCGCTCTTGGAATCTTCGGCCTAGTATGGAATTT GTCTTCACTTGTATCTCGCATTTGGGCTGTGTTCGTGCTCTTTGTAGCCTTCAAATATTACCAACAAAATTATTTGTTGAGAGATGAATGGGTGGAAGAT GAAATAGGATCATGTGAAGAAACATGGCATGAACCCGTTGGAGTTGGAGTTCAGAAACAAATAGAATAATATAAGAATTCTGAAAGGGGTTTGTGATACA ACAACCACATTGGATTTAAGCATGCTTCCCCACTTCAATGCTGCGTGGTAATTTCATTTTTATAGTGTCATAGTTTTCCCCTCCTAATTAATTTTTTATC CATCGTAAAATTTGCTGTGTTACAAGGTTGAAAAAGTCATTAGGATTCAAGAGCAACAGGAAATAACCAATTGGATGTTTATGTTTTGTAATTAACATTC AGTTAGAATAATAACACTTGAAATTCATTATGGTGCTGACCTGTTAAAAATTTACGTAGCTATTTGATGAACATTGCATGGTGTATTATCAAGAAGGAAG GAAACAAAATGAAAAGTTTATACATTTTGTGCACTATTTGGGATAAGGCTCCTTTCCATTTTTTGCTGTATTTTTTTTTCATCGTAAGCCATTATAAATA AAATAAGTTTTGGG BLAST |
Tissue | pods |
Gene name | LI_gene_162823; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368452
Blastp | Reticulon-like protein B21 from Arabidopsis with 34.29% of identity |
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Blastx | Reticulon-like protein B21 from Arabidopsis with 59.48% of identity |
Eggnog | Reticulon(ENOG4111T8T) |
Kegg | Link to kegg annotations (AT5G58000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463392.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |