Id Trinity | TRINITY_DN48640_c2_g6_i1 |
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Name Transcript | Ll_transcript_370095 |
Sequence | CTAACACCTCTTACATTTGTTCTTGTTTTTTTAATAATGTTGGAAAATTGATAAAGTCACAGGCAGTGTTTGTTGACCATAATCCAGTTCCATAGATCAA AATCTATAGATTATTGCATCAATCATTCAATCTTTTTTCTTCTTAATTTCTTCTGTTTTCTCAGTTTCTATTACAATTTGCATTAACACTAACCAAACAA TGGAAATGGAAGTGGAGCTTTCTTCTGTTCAACTCAAAATGCATTCTCAAACCATTCTTCAAAAGCAAAAGGGTGGCCTTATTACTATGCCTTTCATCAT AGGTTCAATTCTCTTTCTTTTCTTTGAATTATGCTTTGTAATTGTATTATGGCAGTGTTTGGAAGAACCCAGAGAAAGTTTGTTTAGGCTTATGAGAATA ACTTGTTAAGAAAATAGTTCATGATGTTAGTATAAGTTTTTTTTTAGATTATTATTTCAATTAGCTTGTCAAAATAAGTTCTTTTTAGCTTATTTCAGTA TGGTTAGTGTTGAATATAGAGAAAGTATGTTTCTTTAAGATTATTTCAGAAATGGTCATAGTCCTGAACCTGCCCTATATATTTGTTGTTGATTTGAGTA CAAAAATGTTATGCCATTGCACAACTTGGTTCTTGCATTACCTTGTAGTTTATGATTAAACACTATGAAGTTTCGCGAGAAGTTGTTAGAATCAGTGGTT CGAAAATTATGGTCCTATGTTTATATGACTATGTATGTGTTTGCGATAAGGGGCGACCCCCTGTAACCCAAGTCTTCAATAAAAAACGTTTGAAGAATGC ACCACCTAGACAGTCCCGGACTCACGAACAGATGCGACCCAAAAAGCGCATCGCATCTGTTCGTGAACCAAGGGCTGTCTGGGTGGTGTATTCTGCCAAC GTTTTCGGTTGTAGACTTGAGTGATTGAGGGTCGTCCCTTATAGTCTATGAGCAAAAACTATGAAGTTTCACGAGAAGTTGTTAGAATCAGTTGTTCGGA ACTTCGGATAATTTATGCTCGTATGTTTTATGACTATGAATGCGTTTGACAGCAAATGAAGCACTTGCAAGGGTTGCAACTTTAGGTCTTTTGCCAAACA TGATATTGTATTTGATGGGGAACTATCATCTTCATTTGTCACATGCTACCCATATACTCCTCTTATCTGTTGCAACCAACAATTTCACTCCTCTTATTGG TGCTTTCATAGCTGATTCTTATCTGGGTCGATTCCTCGCTGTTGGTTTAGGTTCCTTCATCACTTTCCTGGGAATGGCACTTTTATGGCTAACAGCCATG ATCCCACAGGCGAGGCCGCCTCCTTGCGATCCTGCAACCGGAAAATGTAAATCCGCAACAAGCGGGCAAATGACAATGTTACTATCTTCCCTTGCTATCA TGGCCATAGGAAATGGTGGCCTTCAATGTTCCCTTGCTTTTGGTGCAGACCAAGTGAATAAAAAAGATAACCCGAATAACCAGAGGGCCTTGGAAATATT CTTTAGCTGGTATTATGCTTCGACCGCAATTTCTGTCATAATGGCCTTCACCGGAATAGTATATATCCAAGATCATTTTGGATGGAAACTAGGCTTTGGA GTTCCATCAGCACTTATGTTCTTATCGACTTTCTTCTTTTTCCTCGCTTCGCCACTTTATGTAAAAAATGAAACACATAGCAGCTTGCTCACTAGCTTTG CACAAGTAACAGTCGTGGCCTATAAGAACCGGAAACTTCGATTACCACCTAAGAACTCAGCTGGAATGTTCCATCATAAGAAGGACTCCGATCTTCTTGT TCCAACCGATAAACTGAGGTTTCTGAATAAAGCTTGCTTTATTAAAGACCGAGAAAAAGATATAGCCTCGGATGGGTCAGCCGCATGTCCATGGAGTCTC TGCTCGATAGATCAAGTAGAAGAGCTAAAAGCCATTGTTAAAGTTTTTCCGCTGTGGTCGACCGGGATCCTGATGTCACTTAACATTGGAGGATCCTTTG GATTGCTGCAAGCTAAATCCTTGAATAGACATATCACTTCAAACTTCGAAGTCCCCGCAGGTTCTCTTTCTGTAATCATGATATTTACGATATTTGTATG GATAGCTCTTTACGATCGTGTCGTTATTCCTCTAGCATCAAAGCTTAGAGGAAAACCGGTTAGGATCAGTGCCAAGAGAAGAATGGGAATAGGTTTGTTT TTCTCTTTTCTTCACTTGGTAACTGCAGCTATTGTCGAGACTACACGGCGAAAGAGAGCGATCAAGGAGGGTTATATTAACGATACTCATGCAGTTTTGA ATATGTCTGCCATGTGGCTTTTCCCGCAACTTTGCTTGGGCGGAATAGCCGAAGCGTTCAACGCGATAGGCCAAAATGAGTTCTACTATGCCGAGTTTCC TAAGACTATGTCGAGCATTGCATCGTCCCTTTTCGGATTGGGAATGGTTCCAGGATACTTGTTGTCTTCTTTGCTATTCAAAATTGTGGAAAACTACACT TCGAGAGGAGGAAAGGATGGGTGGATTTCCGATAATATTAACAAGGGTCGATATGACAAGTACTACTGGATTCTTGCTTCACTGAGCGGTGTTAATATAC TGTATTATTTAGTATGTAGTTGGGCTTATGGACCTACTAGTGATGAAGAACACAAGGTAATTGAAGAAAATGGTTCAAATGAGGAAGAATTTCCATTAAT GGAATTAGGGATTGAGGGTCACTATGACAAGGTATCCTAGGTTAGTGAAGAAATTTTATGAACTTCATCATGTAACCTAGCTGCATTTTTTTCGGTATAA CCACTGGTATCCTTTTACGGGTAAGGAACTTCATCAATATGATAAGTGTTCATTTAACTAGTGATCGAAAATATAAAAAAGAGTGTGACAACTAAAATGT GCACAAAGTTAATTAGCTTAGTATATATACTCCCTAGCGTACCATATTTGATGGGTAGCGGATTGCGTACCGTGTGCCTGTATCATGAAAATAGAAAGAG T BLAST |
Tissue | pods |
Gene name | LI_gene_162866; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370095
Blastp | Protein NRT1/ PTR FAMILY 1.2 from Arabidopsis with 55.4% of identity |
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Blastx | Protein NRT1/ PTR FAMILY 1.2 from Arabidopsis with 55.4% of identity |
Eggnog | transporter(COG3104) |
Kegg | Link to kegg annotations (AT1G52190) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456220.1) |
Pfam | POT family (PF00854.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |