Ll_transcript_370113

• Id Trinity: TRINITY_DN48640_c3_g4_i2
• Name Transcript: Ll_transcript_370113
• Sequence: CACAAAGGTCTATAAATTAAGTGGCACCCCTTATCATTATTCTTCACATTTCCACTTTACATTACCTCTCACTAGTTCAAGTCCAACATTGAAACTTCAA TTTCAAAGAAAAAATGGCTCTCGTTGGTTTAGTCTTGGTTAGCCTTCTCTCAATGTTCTCATCTGCCTATGGCTATGGAGGGTGGGTTAATGCACATGCA ACCTTCTATGGAGGGAGTGATGCATCAGGGACAATGGGCGGTGCTTGTGGATATGGGAACCTATACAGTCAGGGCTATGGAACAAACACTGCTGCTTTGA GCACTGCTTTGTTCAACAATGGCTTAAGTTGTGGCTCTTGCTATGAGATTAGGTGTGTTAGTGACCGTAAGTGGTGTTTGCCTGGGTCAATTTTGGTCAC TGCAACCAATTTCTGTCCACCAAACAATGCCTTGCCTAATAATGCTGGAGGATGGTGTAATCCTCCTCAGCATCACTTTGATCTTGCTCAGCCTGTCTTC CTTCGCATTGCCCAATATAGAGCTGGAATTGTGCCTGTTTCTTACAGAAGGGTTGCCTGCAGAAGAAGGGGAGGAATTAGGTTCACAATCAATGGTCACT CCTACTTCAACCTAGTCCTCATCACAAATGTGGGTGGTGCTGGTGATGTGCATGCTGTGGCCATCAAAGGTTCCAGAACAGGATGGTCTTCAATGTCAAG AAACTGGGGTCAGAACTGGCAGAACAACAACTATCTCAATGGCCAAACCTTGTCCTTCAAGGTTACCACAAGTGATGCCCGTACTATTGTCTCTTACAAT GTTGCTCCACCTGGTTGGTCCTTTGGACAAACATACACTGGTGCCCAATTCCGCTAGAAATGCTATATCCAAAGTTTCAATTCATAAATTTCCATACATT TCATTATATAGTTTGTTACAATTTCTCATTCCAAATTTAAGTGTTAGTATTAGTATGACTCTAGTATACTAAGGTATTAGATAGTATGCTACTTGTTAAG GGGTGTCTAGAAAGCGGGAATGGCCTATTTTAATCTAGCTCTTCATTGTGTTTATTTGATTGTGTTAATGGGGAGGGTCCTATTTTTTATGGCCTTCTTC AATGTTGGGGTCTCTTTTGTATAATCTTTGAATGATTTTAGAAACTTCTGCTGGTTAAAAGAAGCTGGTAGAGGTGAGCTTTTTATATGTAAACTACTAA GTAGGAAGAGGTGGACAATTGAACCACCCGCCATTAGTACTGGAATGGTATTATTTTCTCCATCTTTTTGGGAGTGTTGGAATCATTGTTTGCTTCCCAA ATTGTTGTAAGCAGCATTGGCTTGATGTCTTTGGTTGTATTATTTACTTATTAGAGACTAAAAGTGTAAATTTTCTTATTTCTGCCTGTAATGGAAATGA ATTTACTGGTACTCTTGCTATCTCATTTT
• Tissue: pods
• Gene name: LI_gene_162872;
• Additional information: details;

Expression of Ll_transcript_370113

FPKM

• PAB: 36.4
• PNAB: 53.9
• PS1: 33.2
• PS2: 9.7
• PS3: 12.2
• PW1: 73.5
• PW2: 52.8
• PW3: 34.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_370113

• Blastp: Expansin-A1 from Arabidopsis with 81.6% of identity
• Blastx: Expansin-A1 from Arabidopsis with 86.46% of identity
• Eggnog: loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found(ENOG410YCRV)
• Kegg: Link to kegg annotations (AT1G69530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003518007.1)
• Pfam: Lytic transglycolase (PF03330.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;