| Id Trinity | TRINITY_DN48641_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_369842 |
| Sequence | ATAGCACATGCTTAACGCACTAGTATCAGAATTCAGAATAGTTACCATTTTCTCTGTCTCTTCTGAATCGTTGATTGATTGAATATGGCAACACAGAGAT TCGGTTCTCCACCAGCCTCAACGCCCGAGGAGAACGCTCTGTTTCTTGATATACTGCATGAAGCTCCTCTCTTTGCTCACCGGAAAGCTGCAAGGGTTGT TGGCAGTGTTTTCTATTGCATTTTACTGGCTGGTTATGCTACTTTGGCCATTGGAGCTCCATGGATATTTCGTCCTCTACAACGAATCATCTCTCCGGTG CTTTGTAGTTGTGACTTTCTTCTCTTGCTATTAACAGGGATCTTTCAACAATATCTGGTTTACCAAGTGCAGAAAATACGCTTGCAGGGATATTATAGTT TCAGCCAGAAGTTGAAATATATTGTCCGCATACCCTTTGCCATTACAGCTTATGGAACCGCTGCAATGCTTCTTGTTATAGTCTGGAAACCCTACACCAG TTTTATGTCAATCTCTGCAATATTGAGGATTACCATGGTAGTTGAAGCTGTTTGTGCTGGATCATTTATGTGTGTTTACATTGGTTACATACACCAGTAC AATTCATTGAACTCTCATCCTGATGTTCTGAAATCCTTATACTCACCACTTCAACCATCAAACTCTTTGGAGGGTCTAAGGTACCATGATGGTGGCAGGC TCTCTGATCAGCAAATGGCTTTGCTACAATACCAACGTGAAAATCTTCATTTTTTGAGTCAAGAGATTCTTCGATTACAAGAGTGTTTAAGTAAATATGA AAGAACTGTTGATCGGAGCACACCTCAGGTTGACCTTACACATCTATTAGCAGCTCGCAATCAAGAATTACAAACACTTTCTGCAGAGATGAACCAAGTG CAGACTGAGCTAAGGTTAGTCCAGTCTTTGATTGCTGAGAGGGAGTTGGAGATCCAGAATGTTCAGATGTCCAACAATCAGTATGCAGAAGAGAATGACA GACTCAGAGCTATTTTGGGAGAATGGAGCACCCGGACAGTGAAGCTGGAGCGAGCACTGGAGGCTGAGCGGATATCAAATATTGAATTACAAAGGAAGCT ATCCACGCTAACAAATCAATCACAAACACCATCAGAAGCAACTGAGTAAAGAGCTTAAGTCCCCTGCTAGTTGCCACGCATATTCACATGATGATCCTTA AAATCCATATAGTTCAAATGAGGTTGAAAAATGTAAATTGGACAAGTGTCTATATTGTACATAATTTTTACCGGGAGTTTGTTATATAATTTTCGATGTG ATGAGGATTGAGTTTTCACTTTTCACTCCTACTCCACTTAAGTGCATCCCTTCCCTTTGTTTTATATCTTTCTACTATATTTAAAAGGAGGTAAACTCAT GCATCATTCAATCAATACCATGTCAAAAGTATTCCATCATTTCTATATTTAACAATTGGGAGCATATTTTGTACACTGCCTTCATTTTTAATAGTTTCAG ACTTCAGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_162878; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369842
| Blastp | Transmembrane protein 192 from Mus with 24.38% of identity |
|---|---|
| Blastx | - |
| Eggnog | NA(ENOG4111V8N) |
| Kegg | Link to kegg annotations (73067) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003533784.1) |
| Pfam | TMEM192 family (PF14802.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |