Ll_transcript_368777

• Id Trinity: TRINITY_DN48644_c4_g1_i10
• Name Transcript: Ll_transcript_368777
• Sequence: CACTCTCACTTTTCTTCAAAACTTTTTTAAACCCTAAAACTCTTTCTCTGCTATATTTTTGTTTTAATTCCTTTTTACGATGCTTGATTTTGCTGCTATA ACGTTAAGCCACATTTCATGCCATGATTTTGAACTTTAGATCTGTTTTCTGGTTTCAATGCCAAAATAGCATAGCTTATTATTATTATTATTATTGGTGT TGTTCACAGCGTGCTTATTTCCATGTAGTTACTGATACTACTTTATAACTACGACGTGTTGTGAAAATTTGGTGTTTTTATTTCTGACTTTTCAATAGGT GTAATGTAATGAACTGTGAGCAATTTATTAGCCTCATTTGGTCCTGTGAATATTGCTCTCTTTATGAAGGAAGTGATTTTCGAAATTCTGTTGTGATGGC ACCTTTTCTTCTTTACATATAGACTACTCTGCTTTGGCTTTTCTACTTTCTAATGTGATTGATGCTTATTATTTTTTTCGTAATAGGTCGGGTTATGAGC TTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTAAAGTTAAC TGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGCCATTCGTTTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGAGGATAGAC ATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAGGA AGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAGAGTGCT GGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGCTTCACTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCTGAAAGAAA TTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTTGTACAGTA TTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAAAATATCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATGCTATTTAT AACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGCTCGAGCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGACGTGCTTG ATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAGAACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAAAAACGACG AACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATCTAAAGGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATGCTGTAAAA CAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGACAAGATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAATGCAATTG CCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAGCAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGATAAGTGGCT TCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGCAGGAGCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTCAGCTTCAT GAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGAATCTCTCATTACAAAATCACGTGAAGGGTTTAATCATCATAAAGAACAAA GAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAACTTACTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAGGCTGAAAA GAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATGGTCCTATT ATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTACTGCTGGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGAGACATCTA CCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTTATTCCCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCACAGAGTTC TGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACACCCGCATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGAATCTGGAT GTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTACGATC ACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGACAATATTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCCAATCTAAA AGAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTGATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACAGCTTAAGCAGGAC ATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAATAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATTGACCAGCTCAAGG CTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCATTTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCTGAAATCAA AGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGACTGAAACTCGGAAATCAGAGCTGGAAACTAATCTAACGACTAACCTTAGGAGA AGAAAGCAAGAGTTGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTTGGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTGCTAAAA AATCGGTTGATGATGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATAAAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATGAAATGAATAAATT GAAGTCTTTGGAGGATGATTATGAAAGAAGACTTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTGAGTAAAAAAAATATCTATTCTTCTAAAGAAGAC GAGTATACCAAGAAAATAAGGGAATTGGGTCCATTGACATCAGATGCTTTTGAGGCGTACAAGCGGAGGAACATCAAAGATTTGCATAAAATGCTGCACA GGTGCAATGAGCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTTGACCAATACATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGGCA AGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCAGTACTAGATCAACGGAAGGATGAATCAATTGAACGGACTTTCAAAGGTGTTGCT AGGCATTTTCGAGAAGTATTTTCGGAACTTGTCCAGGGGGGCCATGGCCATCTGGTTATGATGAAGAAGAAGGATAATGATAATGATGATGATCAAGATG AGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATTGGAGTGAAAGTAAAGGTCTCTTTCACTGGACAAGGAGAGACACAGTCCAT GAAGCAGTTGTCTGGGGGTCAAAAAACTGTCGTTGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCAGCTCCCTTTTATCTATTTGATGAGATT GATGCAGCACTGGATCCACAGTACCGAACTGCTGTTGGAAGTATCCATTTTATTATGTTATCTTCTTGTCATGCCAATTAACTCTTTTGTAATTCTTTAA TTGATGTTTACTGCATACTGCATCTTACGTTGCTTATTCCATAAAATTATACTAGTGCATATTGAAGGTGGGGTTTTTTGATGCATGTGATGAGTCTTCA ACCGTTGGAGATTTAAAAGTAGCTATCATACCAAGTGATCCAGACACCAAATCTCACTTTTCCCCCATTTATTTTTAAATCTTAGTTTTTAGTGCCTGTC ATTTAATAACTTGAAGCTTTAAATTTTAGTGGTTATTTGTCATCCACAGTTTTGCAAGGATTATTTTTTTTTAATACCAACAGGCTTAAGCATAAGGGGA TGAGCCTCGGCGCAATAGTAGTGTTGCTTACTTTGTGACCTGGATGCCATGGGTTCAAATCCTATAAACAACATTGTCACTTACGAGGGTAAGACTATAT ACTTTTGTCCTCCCCATACCCCACTGAGTGGGAGTCTTGTGCATTAGGCAGTTCTTTTTTTCCTCCAACAGGCTTAAGCATGTGCTCTTTCTTTTAGTCA AGGTTCATAGCGAAAATGCTCACACATATATTCTGGTTTCTTTTCATTCCCTCACGTATTAGTTGCAAACACACCTCACGGACACTTGAACATGACAATA GACTGTTTTTGCATGAGAAATATAATTTCAAATCAGTTTTAAAGGCTATCATTGCATGTTTGATTGGGAGAAGTATATTTTAGCTTTGATATTTTTCTAT GAATGAGGGGTTATTGCTTTATAGCAAGCATGTTTCTCTTGATCTTATTTAGGGCTTATCTATACTGGCGATCAGTACGTTTTGAATGGAGAAAGGTCGG GAACTATTTACATTGAGATATTGGTTTATGGTGATATTTAAATATAAAAGTTCATTCATATTTAGTTGTTTAGTTGTTTACTATATTTTGATTGGCATCT TGTGTCTTTTATACTGTTGTGCCTTTGAGGATTCTTAACTTCCGTAGATATGATCCGACGCCTGGCAGACATAGCAAACACACAATTTATCACAACAACG TTCCGCCCAGAGCTTGTCAAAGTTGCTGATAAGATATATGGAGTGACTCATAAAAACAGGGTCAGCCGTGTTAATGTCGTGTCTAAGGAAGACGCACTAG AATTTATTGAGCACGATCAGACACACAATGCTGAATAAGGTCTTACTAATGCTAGGACATTTTGAGGAGTAAGGGGCGTGGCTGGTTGTGATGTTGTCCA TCTGGGACATTCAAGAGTTAGGTGCTTCTGAATTCCATGTTGTCAACCACATAAAAGTAGATTGCAGACTCCAGTTTGTCTTAATTCTTCAATCTGTTCT TCCTAGATTTATATAACCCAGTATTGCTTCTCACCTGCTCTCTATTTGTGTAAATTCATTGGACTTTGTTAACATCAAAATGTTGTGCTTGTTGTGGTAA ATTTGAGTTTGTTAACCTGCTCTCTCTATTTGCTAATACAATGTTTTAAATTCAGAGTTTCATATATGTATAAATTTGCATGTTATCTGAAAGCTTACTC ACATTTTTATACAAGTCTTTGATCCTTGTGCTTTTTCCTGATAGAACAATTGATATGTTTGTTGGTACATTTTAGTGTCAGAAAACATAATTCTGACTAA TGTTGTTCTTATCGTGCATAATGGCCAACCCGTCTTTAATGTTGG
• Tissue: pods
• Gene name: LI_gene_162895;
• Additional information: details;

Expression of Ll_transcript_368777

FPKM

• PAB: 2
• PNAB: 5.7
• PS1: 7
• PS2: 2.9
• PS3: 5.7
• PW1: 4
• PW2: 4.2
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368777

• Blastp: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.18% of identity
• Blastx: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.18% of identity
• Eggnog: Required for chromosome condensation and partitioning (By similarity)(COG1196)
• Kegg: Link to kegg annotations (AT2G27170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434196.1)
• Pfam: RecF/RecN/SMC N terminal domain (PF02463.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;