Ll_transcript_368778

Id TrinityTRINITY_DN48644_c4_g1_i11
Name TranscriptLl_transcript_368778
SequenceTTTCACTTATTCTCCAACTAAATGATGTAGTTTGTTCTATTTGATTTATTCTCCTACACGTAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAG TTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTCTCCATTGTTACTGAATCTTCTTTGACTCTGAGGTCGGGTT ATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTAAA GTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGGTAAGAACTAAGAAAGTCCTAATTTTTTCCTATACGACTCTATTTAGT CTGACTGGATTTATTCATTGAAAAACAACTGAAATCTGATATATCTCTGACCTATTATCTACTGATCTTTCCCCTTTTTGTATCTAGCCATTCGTTTTGT TTTAAGTGATCTATTTCAGAACCTACGCAGTGAGGATAGACATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGATTGTG TTTGATAATTCAGACAACCGTATCCCGGTAATGATTTGATAATTTCTTTTTCCAGTAAGTTGCAGAAGGAGGATAATTTTCAATTTTTTAATTGTTTCTT AAACTTTGTTTAAACATCACTTAATGCATATTTTCTTTTAGGTCTAGATAAAATAATGATGCTATTTTTTTTGTAGTAAACAGTTTATAGCAAAATCATG ATTGCTATGGTGAGGAAAGTATAGCCTTATTTGACAGTTATTCTATTTCAATCACAGGATAAATTGTCTAGTGGCTGTTATGGAGCATATTCTCATGGGT TTTGCTAATTAGTCACCTTTCTTTTTGCTATTTTTAATCTCTATCTTTCATGTTGTGATGATTGGTCGTATATTTATTTTCTTGTGTTGCGCTAATGAGT GCATATTAGTGGCTATACTGCTCAACGTATATGGAGAAATGCTGTAGGCATAAGGGAAAGATTTTTAGTTTTGGGTTAATGAAGATTTTTGTGATGACTG GATGAGTATTATGTTTTTTGCCCTTTAATTTTTTTGCCATATTTATCTAATTTTCTATATTGATTAATGTTCTTCTCAATTCCATTTTTGAAAGTCCTGG CGCCGATCTTATGGGTTTTGATGTTAAATACTTTCTGCTAGCCTTGACGTAATTTTATCAGTGATGAGATGTTCTTGTTTGGTCAGATATTTGAATATTT TTATTTTGATGACAGATTCTTTTAGTACAGTCACATTTTCATATACTTGTTTTAGGTCAACTATCCTTTTTTAAGGTTGCAAGTGAAAACTCAGTGTCAG TCCTTGCTGATGTGATGTATACATTGCTTCAATTTCCCTTTCTCTGTTCAGATGAGTGGTTTATGTTCCATAACCACTTATTTGCAACATTTTGTTTCTT TGCATTATCTTAGTATCTGTCTGTGCCCCTGATTAGGTTGACAAGGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAG ATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAGAGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGC TTCACTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCTGAAAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATA ATGCAGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTTGTACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAA AATATCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATGCTATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGC TCGAGCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGACGTGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACA AAAGAACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAAAAACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATC TAAAGGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATGCTGTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGA CAAGATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAATGCAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAG CAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGC AGGAGCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTCAGCTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGA ATCTCTCATTACAAAATCACGTGAAGGGTTTAATCATCATAAAGAACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAA CTTACTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAG TTCGGAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATGGTCCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTAC TGCTGGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGAGACATCTACCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTT ATTCCCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACAC CCGCATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGAATCTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGA AGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTACGATCACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGAC AATATTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCCAATCTAAAAGAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTG ATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACAGCTTAAGCAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAA TAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATTGACCAGCTCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCAT TTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCTGAAATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGACTG AAACTCGGAAATCAGAGCTGGAAACTAATCTAACGACTAACCTTAGGAGAAGAAAGCAAGAGTTGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTT GGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTGCTAAAAAATCGGTTGATGATGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATA AAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATGAAATGAATAAATTGAAGTCTTTGGAGGATGATTATGAAAGAAGACTTCAGGAAGAAGCAAAAG AATTAGAGCAATTGCTGAGTAAAAAAAATATCTATTCTTCTAAAGAAGACGAGTATACCAAGAAAATAAGGGAATTGGGTCCATTGACATCAGATGCTTT TGAGGCGTACAAGCGGAGGAACATCAAAGATTTGCATAAAATGCTGCACAGGTGCAATGAGCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTT GACCAATACATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCAGTAC TAGATCAACGGAAGGATGAATCAATTGAACGGACTTTCAAAGGTGTTGCTAGGCATTTTCGAGAAGTATTTTCGGAACTTGTCCAGGGGGGCCATGGCCA TCTGGTTATGATGAAGAAGAAGGATAATGATAATGATGATGATCAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATT GGAGTGAAAGTAAAGGTCTCTTTCACTGGACAAGGAGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTCGTTGCCCTTACACTTATCT TTGCCATACAGCGATGTGATCCAGCTCCCTTTTATCTATTTGATGAGATTGATGCAGCACTGGATCCACAGTACCGAACTGCTGTTGGAAATATGATCCG ACGCCTGGCAGACATAGCAAACACACAATTTATCACAACAACGTTCCGCCCAGAGCTTGTCAAAGTTGCTGATAAGATATATGGAGTGACTCATAAAAAC AGGGTCAGCCGTGTTAATGTCGTGTCTAAGGAAGACGCACTAGAATTTATTGAGCACGATCAGACACACAATGCTGAATAAGGTTTGGAACCTTGTAACT TTCTTATATTTCTCTTTATGATTGTAATATATGCCCGCAGCTGTTTGAGAGCCAATAAAAAAGAAAGCAACTAGAGTGAAAAAGATTGAAAAACACTATC ATAGAAGTAGCAGCAAATTTATAATAGCTGTGGCTGTAGGTCTTACTAATGCTAGGACAT BLAST
Tissuepods
Gene nameLI_gene_162895; 
Additional informationdetails; 

Expression of Ll_transcript_368778

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_368778
BlastpStructural maintenance of chromosomes protein 3 from Arabidopsis with 69.65% of identity
BlastxStructural maintenance of chromosomes protein 3 from Arabidopsis with 70.04% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT2G27170)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434196.1)
PfamSMC proteins Flexible Hinge Domain (PF06470.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;