Ll_transcript_368782

• Id Trinity: TRINITY_DN48644_c4_g1_i15
• Name Transcript: Ll_transcript_368782
• Sequence: TTTCACTTATTCTCCAACTAAATGATGTAGTTTGTTCTATTTGATTTATTCTCCTACACGTAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAG TTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTCTCCATTGTTACTGAATCTTCTTTGACTCTGAGGTTTCTCT CTCTCTCTCTCCTCAACTGCAAGGAATAAATTTCACCAACGCTTCTTTTTTTCTGTCGGGTTATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGA TTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTAAAGTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAAC AAACTTCTTCCATGCCATTCGTTTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGAGGATAGACATGCACTACTCCATGAAGGAGCTGGACACCAG GTTGTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGACAAGGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAA AGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAGAGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGT ACAACAAGGAAAGATTGCTTCACTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCTGAAAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGC CGTGAAAGTTTGAAAATAATGCAGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTTGTACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGG AAAAAGAGGAACTAAGAAAATATCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATGCTATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACT TACAGAGATAGAAGATGCTCGAGCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGACGTGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAAT ACATTGAAAGATGTAACAAAAGAACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAAAAACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTG AGCTTGATGTCAAAGATCTAAAGGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATGCTGTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGA CTCGATGAATGAACTGGACAAGATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAATGCAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTT AGTATACTTTACCAAAAGCAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGC TTTCTTCTAACACAGGGCAGGAGCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTCAGCTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTC AGAGATTACTACATTGGAATCTCTCATTACAAAATCACGTGAAGGGTTTAATCATCATAAAGAACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTA TGGGCCAAAGAGAATCAACTTACTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCA GAAGAGGGTTGAATTCAGTTCGGAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATGGTCCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTT CACCGCAGTTGAAGTTACTGCTGGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGAGACATCTACCCAGATAATTAGACATCTTAATTCACAGAAA GGCGGACGAGTTACATTTATTCCCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCACAGAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACT TTAAACATGAATATACACCCGCATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGAATCTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCT GGACTGCATAACATTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTACGATCACAGACGATCAAAGTTGAAGTTTATGAATATC ATCAAGCAGAATGAAGACAATATTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCCAATCTAAAAGAGATAGATGATAAAATCACAAAAATTGTTA CCGAGCAGCAGAAGATTGATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACAGCTTAAGCAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGT TTCTAAAGCAATTGCAAATAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATTGACCAGCTCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGC ACAGAGCTCATTGACCATTTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCTGAAATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGG CCGAGCGTGTTGAGACTGAAACTCGGAAATCAGAGCTGGAAACTAATCTAACGACTAACCTTAGGAGAAGAAAGCAAGAGTTGGAGGTTGTAATATCATC TGTGGATGCTGATTTTTTGGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTGCTAAAAAATCGGTTGATGATGCAACAACGCAGCTTCGA GGAGTTTCTGAAAGTATAAAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATGAAATGAATAAATTGAAGTCTTTGGAGGATGATTATGAAAGAAGAC TTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTGAGTAAAAAAAATATCTATTCTTCTAAAGAAGACGAGTATACCAAGAAAATAAGGGAATTGGGTCC ATTGACATCAGATGCTTTTGAGGCGTACAAGCGGAGGAACATCAAAGATTTGCATAAAATGCTGCACAGGTGCAATGAGCAACTGCAGCAGTTCAGTCAT GTAAACAAGAAAGCACTTGACCAATACATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTA GAGAGCTAATATCAGTACTAGATCAACGGAAGGATGAATCAATTGAACGGACTTTCAAAGGTGTTGCTAGGCATTTTCGAGAAGTATTTTCGGAACTTGT CCAGGGGGGCCATGGCCATCTGGTTATGATGAAGAAGAAGGATAATGATAATGATGATGATCAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGG AGAGTAGAGAAGTACATTGGAGTGAAAGTAAAGGTCTCTTTCACTGGACAAGGAGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTCG TTGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCAGCTCCCTTTTATCTATTTGATGAGATTGATGCAGCACTGGATCCACAGTACCGAACTGC TGTTGGAA
• Tissue: pods
• Gene name: LI_gene_162895;
• Additional information: details;

Expression of Ll_transcript_368782

FPKM

• PAB: 0
• PNAB: 1.7
• PS1: 3.5
• PS2: 2
• PS3: 2.3
• PW1: 2.2
• PW2: 1.5
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368782

• Blastp: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.3% of identity
• Blastx: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.3% of identity
• Eggnog: Required for chromosome condensation and partitioning (By similarity)(COG1196)
• Kegg: Link to kegg annotations (AT2G27170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434196.1)
• Pfam: RecF/RecN/SMC N terminal domain (PF02463.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;