Ll_transcript_368770

• Id Trinity: TRINITY_DN48644_c4_g1_i3
• Name Transcript: Ll_transcript_368770
• Sequence: TTTCACTTATTCTCCAACTAAATGATGTAGTTTGTTCTATTTGATTTATTCTCCTACACGTAAACGTGACGAGGCTGAAGTTAACCCACATAGCGCACAG TTTATCCTTCGCACCCAAAAAACACGTATTTTAGCGTAAAACTTTTTTCAAATTGTTTTCTCCATTGTTACTGAATCTTCTTTGACTCTGAGGTCGGGTT ATGAGCTTATAACCGTTTCAAGATGCACATTAAGCAGATTGTGATTGAAGGCTTTAAGAGTTACAAAGAACAAGTTGCAACAGAGCCTTTCAGTTCTAAA GTTAACTGTGTCGTTGGTGCTAATGGATCTGGGAAAACAAACTTCTTCCATGCCATTCGTTTTGTTTTAAGTGATCTATTTCAGAACCTACGCAGTGAGG ATAGACATGCACTACTCCATGAAGGAGCTGGACACCAGGTTGTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAACCGTATCCCGGTTGACAA GGAGGAAGTGCGCTTGCGAAGGACTATTGGTGCGAAAAAGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAG AGTGCTGGGTTCTCTCGCTCAAATCCTTACTATGTTGTACAACAAGGAAAGATTGCTTCACTTACCTTAATGAAAGACTCTGAGCGATTGGATTTGCTGA AAGAAATTGGTGGTACCAGAGTTTATGAGGAGAGGCGCCGTGAAAGTTTGAAAATAATGCAGGAAACAGGTAACAAAAGAAAGCAAATAATTCAAGTTGT ACAGTATTTGGATGAGAGGTTGAAGGAGCTAGATGAGGAAAAAGAGGAACTAAGAAAATATCAACAGCTTGACAAACAAAGAAAATCCTTGGAATATGCT ATTTATAACAAGGAAGTTCAAGATGCTCAGCAGAAACTTACAGAGATAGAAGATGCTCGAGCCAAGATTTCTGAAACGTCGGCAAAGATGTATAATGACG TGCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAGAACTTAATAACTTTAACAAAGAGAAAGAAGTTATAGAAAA ACGACGAACGGAGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGATCTAAAGGACAAGATCTCTGGAAATAAAAAAGCCAAAGAAGATGCT GTAAAACAACTTGGGACACTTGAGAAAGAAATTCAAGACTCGATGAATGAACTGGACAAGATCAGTCCTTCATATGAGGATCAAATTAGAAAAGAAAATG CAATTGCCAAGCGAATAATGGAGCGTGAGAAGCAACTTAGTATACTTTACCAAAAGCAGGGGCGAGCAACCCAGTTTCCAAGCAAAGCTGCTCGTGATAA GTGGCTTCAAAAGGAGATTGACGATCTTAAAGGAGTGCTTTCTTCTAACACAGGGCAGGAGCAAAAGCTTATGGAAGAAATTGACCGGCTTAATGGTCAG CTTCATGAGTGTGATGAGTGCATTAAGAGTCGTAGGTCAGAGATTACTACATTGGAATCTCTCATTACAAAATCACGTGAAGGGTTTAATCATCATAAAG AACAAAGAGACATTTTGCATGACGAGAGGAAATCCCTATGGGCCAAAGAGAATCAACTTACTGCTGAAATTGATAAGCTGAGAGCAGAAAAGGAGAAGGC TGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTCAGAAGAGGGTTGAATTCAGTTCGGAAGATATGCAGGGAGTATAAGATTTCTGGAGTTCATGGT CCTATTATGGAGTTGCTGAACTGCGATGAGAAGTTTTTCACCGCAGTTGAAGTTACTGCTGGAAACAGCTTATTTCACGTGGTTGTTGATAATGATGAGA CATCTACCCAGATAATTAGACATCTTAATTCACAGAAAGGCGGACGAGTTACATTTATTCCCCTTAACAGAGTGAAGGCTCCACGCATTACTTATCCACA GAGTTCTGATGTCATACCTCTTTTAAAGAAGTTGAACTTTAAACATGAATATACACCCGCATTTAGCCAGGTATTTGCTAGAACAGTGATCTGCAAGAAT CTGGATGTGGCTTCAAGGGTTGCTCGTAATGATGGTCTGGACTGCATAACATTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTT ACGATCACAGACGATCAAAGTTGAAGTTTATGAATATCATCAAGCAGAATGAAGACAATATTTACGAGAGAGAGGTCCAGTTGAATGAAGTTAGATCCAA TCTAAAAGAGATAGATGATAAAATCACAAAAATTGTTACCGAGCAGCAGAAGATTGATGCCAAACGTGCTCATGACAAATCAGAAGTGGAACAGCTTAAG CAGGACATTGCTAATGCTAACAAGCAGAAGCAATTGGTTTCTAAAGCAATTGCAAATAAGGAGAAGTCACTTGTAGATGTCCAGAATCAGATTGACCAGC TCAAGGCTAGTATGGCAGTGAAACAAGCTGAGATGGGCACAGAGCTCATTGACCATTTAACACTAGAGGAAAAAAAGCTTTTGTCAGATTTGAATCCTGA AATCAAAGATCTTAAAGAGAAACTTGTTGCTTCAAAGGCCGAGCGTGTTGAGACTGAAACTCGGAAATCAGAGCTGGAAACTAATCTAACGACTAACCTT AGGAGAAGAAAGCAAGAGTTGGAGGTTGTAATATCATCTGTGGATGCTGATTTTTTGGATGATGATGCTGAATTGAAGGGTAAAGAAGAACTTAGTTCTG CTAAAAAATCGGTTGATGATGCAACAACGCAGCTTCGAGGAGTTTCTGAAAGTATAAAGGATAGGACAAGCCAAATTAAAAAGATCAAAGATGAAATGAA TAAATTGAAGTCTTTGGAGGATGATTATGAAAGAAGACTTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTGAGTAAAAAAAATATCTATTCTTCTAAA GAAGACGAGTATACCAAGAAAATAAGGGAATTGGGTCCATTGACATCAGATGCTTTTGAGGCGTACAAGCGGAGGAACATCAAAGATTTGCATAAAATGC TGCACAGGTGCAATGAGCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCACTTGACCAATACATAAATTTTACAGAACAACGAGAAGAACTTCAGAA AAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCAGTACTAGATCAACGGAAGGATGAATCAATTGAACGGACTTTCAAAGGT GTTGCTAGGCATTTTCGAGAAGTATTTTCGGAACTTGTCCAGGGGGGCCATGGCCATCTGGTTATGATGAAGAAGAAGGATAATGATAATGATGATGATC AAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATTGGAGTGAAAGTAAAGGTCTCTTTCACTGGACAAGGAGAGACACA GTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTCGTTGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCAGCTCCCTTTTATCTATTTGAT GAGATTGATGCAGCACTGGATCCACAGTACCGAACTGCTGTTGGAA
• Tissue: pods
• Gene name: LI_gene_162895;
• Additional information: details;

Expression of Ll_transcript_368770

FPKM

• PAB: 0
• PNAB: 7.7
• PS1: 11.9
• PS2: 4.8
• PS3: 5.5
• PW1: 6.5
• PW2: 4.1
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368770

• Blastp: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.3% of identity
• Blastx: Structural maintenance of chromosomes protein 3 from Arabidopsis with 71.3% of identity
• Eggnog: Required for chromosome condensation and partitioning (By similarity)(COG1196)
• Kegg: Link to kegg annotations (AT2G27170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434196.1)
• Pfam: RecF/RecN/SMC N terminal domain (PF02463.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;