Id Trinity | TRINITY_DN48644_c5_g3_i5 |
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Name Transcript | Ll_transcript_368795 |
Sequence | GGGAGAGTTAGATATTTGTGATAAAATATGAGATAAAAAAGTAGGGGCCGGTGCGATTGATGTGATAACAGCTGGCCTGTGCAAAAGTTCGTTTACCCAA CACGTTTCAATGGCCCCCCTTTCTCTCTCCCTTCTCCTTTCTTCACCTTCTCCTCTTCCTCTTCTTCACCCTCACCGCCCTATCTTCCACCGTACCTCCG CCGCCGCTTCCGCCACCGATTATGTTTCTACATCAACTTCCGCCTCCACTTCCAATCTGACTCCTAAAGTCGTCGTCACCAGAGAGCGTGGTAAAAACGC CAAGCTTATCACCGCTCTGGCTAAACATGAAATTAACTGTTTGGAACTTCCACTAATCGATCACACGCGGGGACCTGATTTTGACAGGCTCCCTTCTGTA TTAAGTGGTATGTTTTTGGATTACACTATGTGATGAACATTTAAGTATTTGTTAAGTTTAAACCACCCCGTTTTTATCCTGTCAAGACAGTATATTTAAA TCAATTAATATTATTTAACTGATTTTTAGAATAATATTTATGTTTGCTTAGTGGGAAGAATGGTGTGGTGGTGACATTTCTAATGTGTAAGCTAATTTCC ATTCCCAATGGTTTCCTTGAAAATGAAGGGTTATAGCTTAAATGCCTATAGCTATGTTTCATTCAATTTTTATGGTTGTGTTGGCATGTATGTTGATGCT TATGTTGTATCAGGATCTCATTTTACGTCAGGGAGCATTTGTCTGAGCTTCTCCTTGGAAGAATTTATTTTTTTCTATTAAATCTTTCAGCCATTTATTT ATGAATAGTTGGACTGCTAGAGGTGTAGATCACTTTCTCATTTTTTTGGGACTTGATCTTGACCATTTGATGTCATTATCACAGACTATAGATCTTTTGC TTATGAAATAGTTACCCGATTGTAATTAGTTTAATCTGGACCTATGAATGTCAAATATTTTCTATAAGTAGGCTGGGTAAAATTTGGCCTGCTGTAAAGT TCTTGTTCTTTTTTTCATCTCCGGTGTTAAATCTAGCTGATTTTTTCCTGGTATAATTTGTAAAAATTTGGTTGAGATGCCTTTATGTGGAACTATTATC TATAGTCTAAGTTGCCTGGTGAAATTTGGCATTTACGAACATATGATGATTTTGCCAACTTATGAACTCAGTTGTCTATGTTGTATCTTCCGTATCATTT CTTCCTATGACCCTTGATACTTGCAGCTAATGCATTTGATTGGATCATCATAACTTCACCTGAGGCGGGTTCAGTCTTTCTAGAGGCATGGAGTCTTGAT TGTTGTCCTCAGAGCTGCGGGCATGCCTCATGTCAAAATCGGTGTTGTTGGGGCTGGCACTGCAAGCATTTTCAAGGAAGCTTTGCAGTCTTCAGAGCGA TCACTTGATGTTGCCTTTACACCATCAAAAGGTATCTGTGTGTCTAGTTAGGTGAAGGCTGAATATAAATAGCTCCTGCGTCGTACTCCCCAGATTTGCT TCATTACCATGCTGAATGACCGAGTACACAAACATTTCTAAAGTCTTACAAGTACATTGGGCTATTCGAGGAAGATATACCATGTCGCTAATAATTCCAA TATATGCATCTGAATAGGGTAGAACATTAATTTACTTTGGTTGTTTCATGCATCACAGCTGTAACTGGCCAACTGTATGTGAATTGCGAGCCTGGTTATG TTCGGAATTCATCAGTTGATATGATCATATTTTGTTTAGTGTGTTAGTAAAGATATCGAACCTTGCTTTTGTCAAGCAGGATTTAAAAACTTACTCTTCT GAAAGTGAATCTCATCACGAATTTGATAATTTTCAGCAACAGGAGTGACTTTAGCTGCAGAGCTTCCTAAAATTGGAATTAAACCGGCTGTTCTATATCC TGCTTCTGCTAAGGCTAGCCATGAGATTGGTATATGGATTATTGTTGTTGCATTTATTTGTTTTTATACAGCAATTATCATTTTAAACTTTTTTTAATGA GTAAAATCTTAAGTGATAGCCTAATATCCTCTGTGATATTTACATAACCAGAGGAAGGACTCTCGAGTCGTGGGTTTGAGGTTACTAGGATGAACACATA CACAACGGTAAAATATTTTAGCCATGGAGCCCTCTTCTTTTTGAAGTAAACATGGTCCCATACTTCTTCATTGCAAGCAACTGCATATCTATTGATGTTT AAAGTGGATCATTTGCTAATGGTAAATTCCCCTAATTCAATTCGCAGGTGCCAGTTCAACATGTTGACCAAATAGTTCTGAGGCAAGCGCTTGCTGCCCC TGTTGTTACAGTAGCTTCGCCATCAGCAATTCGTGCCTGGAAGAATCTTGTGTCAGATTCAGAGTGGAGCAACTCTGTTGCGTGCATTGGTGAGACAACT GCTGCAATGGCAAGAAGATTAGGATTCAGAAATGTATACAACCCAACCCAACCAGGTCTTGAAGGGTAATCACAAATCCTCTTTTAATACATTTCTCTTA ATAGAATAATCAGTATCTGTTTCCAATATCTGGTCACATGGAGAAATTTTTCTTGTTTAAAATAATTTAGAAGGATATTTCTAAAAGCACATTGGTTTTC GAAATATAGCAGGCTTTAACCATTTATGAATGACTCTACTTTCATTAATTTATTCATTTTTTAAAGGAAAAGAATGTATGAATACTCTTCGAAGTTTGTC CCGTCTTGAAGTAGCTGCATTTTTCTTTCAAATCTGTATCAGAGGTCCTTAAACTTACAAGAACGTGCAAATAGTACTTTAGCTAAAAGGAAACCATTTG GTACTATACAATAGGTCAGTTTTTTTTTAAATGGGGGTAAATGACTATAATGCGTATTATATATA BLAST |
Tissue | pods |
Gene name | LI_gene_162899; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368795
Blastp | Uroporphyrinogen-III synthase, chloroplastic from Arabidopsis with 62.5% of identity |
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Blastx | Uroporphyrinogen-III synthase, chloroplastic from Arabidopsis with 65.79% of identity |
Eggnog | Uroporphyrinogen-III Synthase(ENOG4111P6K) |
Kegg | Link to kegg annotations (AT2G26540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417779.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |