| Id Trinity | TRINITY_DN48649_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_368699 |
| Sequence | CTCTCACTGATGAGCATTGTCAGGTAACTAGTACTCATACTTTTTTCTTCTTGATGAGCAGGTTGCTATTGTTAGGATATTTGCCTTAACTAACATGTTT GTAAAAGAAAATAAAGCATGTAACTGTGTAAGTTAGAGAAAGTGTGAAAGTAAATGGGAGAGTGTGAGTGTCTGTCACTATTTAAACGAAAAGGATGCAA GAGATTGCAGTGTGTAAGCATGAGAAAGTTAGGAAAAGTGGAAGGAAAAAATGAGCTAGTTGGTGTCTACTATTAATATAAAGCATGGGATATGAATTAG AGAAAAATGATCTATAGATTGAAATGAAAGAAGTTTGCATTGGTTTTGTAGGAAAAGAAGAATGACTCACGAGAGTTTTCAAAGGGGGTTAAGCCCTCAA TGAGTTTTGGTTGAGATGTAGGGAAAGGTTGATGGTGAGTTTTAGACTTGTAGGATAGAGGAGATGGAGAATTGGAGATGTCCTAGATCAAATATGTTTG GCTTGTTGCTATGTTGTTTGTGCTTGTTATGACTGGAGTACCATATTTACCTGGTACGCGGTACCAACATGCGACATGTGGTCTGTGGTTCATGCATTTC ATCATTTTTATATTATTATTATAATGAACCCGATACTTAGTATGCAATATGGTGAATACAATACGCGATATATATGGTAAATGATAAAATTGTATAATTG TGGTGGGTGCCACATATTTCCCATCCCCTCAGTGTAGTAGAATTTGTGAGGGAGAAAAGGGCATTATCTGTAGGATACCCCAGCACTAATTATGTCAAGT AATATAATGATAAGGGGTGAACATCGATGTAATGGTAATGTTGCTTATCTTGTGACTGGATGATCTTGAGTTCAAATCCTGGAAACAAATTATTTGCTTG AGAAGGTAAGGTTGCAATGTTGCATACATCTATCTTTCTCATACCCCACTAGGAGGAGCCTCGTGCATTGAACTGCCTTTCTTTTAATATATATAATAGA GCACTAGTTTGACATTTGCTCATTAATTGCTAGATAACCTTGTTCCGTGATATGGGAAAAGAACAAGATATTAGAAAATGTTTCTTCCCATTGGTTAATG CAACTGAACTACCTAAGTGATATTCCAACCCATTGATTAATACAATTTATTCAGAATGCTACTCTGAAAGTGAATAGTCAAAACGGTCATGTAGCACTGT CTCTGTTATCCATACATAATTATTCAGTATCAGATGTTTTACCAAGAAAACTGATAGTGAATAATTATTTGCTTTAAATTTACTCACAGCACTTTTTAAA TAAAGATTTGATTTGTATCGAGAGAAATATAATGGAGTAAAGCTTAACTAGCGGTGTTAAATGTCATTGCAGTATTTTCTATATCAACTATTGAGAGGGT TGAAGTACATTCACTCTGCAAATGTTCTTCACCGAGATCTAAAACCAAGCAATTTACTTCTCAATGCAAATTGTGATCTCAAAGTATGTGACTTTGGGCT TGCCAGAACAACATCTGAGACAGACTTTATGACAGAATATGTCGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTGAATTGTTCAGAATATACTGCA GCTATTGACATATGGTCAGTTGGTTGCATTTTGATGGAGATAATCAGAAGGAAACCTTTATTTCCTGGTAAAGATTATGTTCAACAATTGGCACTCATAA CTGAGTTACTAGGTTCACCAGATGATTCAGACCTTGGATTCCTCAGAAGCGATAATGCAAAGAAATATGTTAAGCAGCTTCCACATGTAGAAAAGCAGCC CTTTGCACAGAGGTTTCCTGATATGTCGCCATTAGCAATTGATCTTGCTGAGAAAATGTTGGTTTTCAATCCCTCCAAACGCATGACTGGTATGCCCCTC TATCTTGTTTAGTAATCCTTTTTTTATAATCGTTATTCTCTTCGTAACTCTTATTTTATTCTATGGCTGCTTAGTGGAGGAAGCACTGAATCACCCATAT TTGTCAAGTCTTCATGAGATCAATGAGGAGCCCACTTGTCCAACTCCTTTCTTCTTTGATTTTGAACAAACAACCCTGAATGAAGAAGATATAAAAGAGT TTATATGGGGGGAGTCTCTGAACTTCAGCCGGGATCAGGCGCTGGAGTAGCCTCGGCCAAAATGATATTTTTCTTAAATATTTTGACTATATGGAATTTC ACAATACAGGTTTGGAGTTTGGTGGGAATATTTTTAGCTCATATTATAAGAAAGTTTATTAGAGGTCTGGAGTTGGTAGAGAAAGTAGTGCATATGATTT TGTAATCTGCAGTGAGAGTATTATTGATTGTTATACATGAAAAAGGATCATGTACCTTTCTTCAAGCCTTTAACTAAGGCTTCTCAATGTATAAATACAA ATATAGTAGTAATACAGAATTTACTGATGATAAGCCACAACATCAGTGGTTGTTTTGTACTTATATAATATTGGGTTTTGTTCTCATTATTTTTTTTCAT CGGATTCATTTATAATCTTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_162926; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368699
| Blastp | Mitogen-activated protein kinase homolog NTF6 from Nicotiana with 84.39% of identity |
|---|---|
| Blastx | Mitogen-activated protein kinase 13 from Arabidopsis with 83.82% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448687.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |