Ll_transcript_368137

• Id Trinity: TRINITY_DN48653_c2_g1_i10
• Name Transcript: Ll_transcript_368137
• Sequence: AAATAAACCGACACGCTTCTTCAATAGCATTTCCAATTCCTTGGTTGGAATTCAGATCCAGGGTTTCTCTTCTCCCTTCATTCACCGATTCGAATATGAA CGTCAAATCAACGCATTCTTCGTATCGTGATCGAACTCACGAATTCGAGAGCATTGCAGAACGCTTGAAGAAATCTCGATCAGCTCCCAATTCCACCAAT TCTACTATTACCACTTCTTCTTCTTCCAGATCCGACGAACACCGATCCGCCATCGCAATTCAATCCGAGTTCAATAAGAGAGCTTCCAAGATTGGCTATG GCATTCATCAAACATCGCAGAAGCTTGCTAAACTTGCAAAGCTGGCGAAGAGAACATCGGTGTTTGATGACCCTACGATGGAAATACAAGAGCTGACGGG TGTTATAAAGCAAGATATAAATGCTCTTAACTCTGCTGTTCTTGATCTTCAGTCACTCTCTAATTCTAGAAATCAGAGTGGTGATTTCTCTGCTGATACT ACGACACATTCGACTACGGTTGTCGATGACCTTAAGACGCGTTTGATGAGCACTACTAAAGAGTTTAAAGATGTTCTCACCATGCGAACCGAGAACTTGA AAGTTCATGAGAATAGGAGGCAATTGTTTTCGTCCTCTGCTTCCAAGGAATCTGCAAATCCTTTTGTCCGTCAACGTCCATTAGCTACAAGGACGTCTGC TAGTTCTTCCAATGCTCAAGCACCCCCATGGGCTAATGCTTCAGGCTCACCATCTTCGTCTCAGTTGTTTCCTAAGAAGCAGGAGGATGGGGAGAGTCAA CCATTGCTGCAACAACAACAGCAACAACAGGAGATAGTTCCAGTACAAGATAGTTACATGCAAAGCAGAGCTGAAGCTCTTCATAATGTTGAGTCCACTA TTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCTCAACAAGGAGAGGTTGCCATCAGGATTGATGAAAACATGGATGATACATTGGC AAACGTAGAGGGGGCGCAAGGGGCATTGTTGAAGTATCTCAACGGCATATCTTCGAACAGGTGGCTGATGATCAAGATTTTCTTTGTATTGATATTTTTC CTTATGGTTTTCTTATTTTTTGTGGCATAGTCATTCTAATTACAGAGAAATGAAAAGAGAGAGCCTCTGGATTTCATTAATATTTATCCCTTCAAAATAG CCTAGGACCAAATTTGTGAAATGAGATATTTGTATGTAGGTACATGAAACGAGGTCGTGAACAGTGTCCATTACTGATTGTCCTTTTATCTTTTTGTGAT TGTCATTATACAATGGAGAGTGGAGACTATCTGCAATATTAATTATTCATGAGAAGCAATGTTTGGTTAATGTGCTCATAAGCTAATCACAGCAAAATTA AAGAATGTATTATTTTGCAATAATATTATCTGTATCTGTAATTTATTGACACCTTTATATCTACAAATATTTGGAACAAGTTG
• Tissue: pods
• Gene name: LI_gene_162970;
• Additional information: details;

Expression of Ll_transcript_368137

FPKM

• PAB: 16.2
• PNAB: 19
• PS1: 13.8
• PS2: 11.3
• PS3: 15.7
• PW1: 20.7
• PW2: 15
• PW3: 8.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368137

• Blastp: Syntaxin-32 from Arabidopsis with 66.76% of identity
• Blastx: Syntaxin-32 from Arabidopsis with 63.14% of identity
• Eggnog: Syntaxin 5(ENOG410Y2MB)
• Kegg: Link to kegg annotations (AT3G24350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415743.1)
• Pfam: Syntaxin-5 N-terminal, Sly1p-binding domain (PF11416.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;