Ll_transcript_368131

• Id Trinity: TRINITY_DN48653_c2_g1_i5
• Name Transcript: Ll_transcript_368131
• Sequence: AAATAAACCGACACGCTTCTTCAATAGCATTTCCAATTCCTTGGTTGGAATTCAGATCCAGGGTTTCTCTTCTCCCTTCATTCACCGATTCGAATATGAA CGTCAAATCAACGCATTCTTCGTATCGTGATCGAACTCACGAATTCGAGAGCATTGCAGAACGCTTGAAGAAATCTCGATCAGCTCCCAATTCCACCAAT TCTACTATTACCACTTCTTCTTCTTCCAGATCCGACGAACACCGATCCGCCATCGCAATTCAATCCGAGTTCAATAAGAGAGCTTCCAAGATTGGCTATG GCATTCATCAAACATCGCAGAAGCTTGCTAAACTTGCAAAGCGTAACCAATTCCATTATTCAATTCTCATTTTCATATTCTTATTATTATTGTTTATTTG TTGATAATCTGTGTTGAATGCTTTGAATTGATGTTGATTTTTGCAGTGGCGAAGAGAACATCGGTGTTTGATGACCCTACGATGGAAATACAAGAGCTGA CGGGTGTTATAAAGCAAGATATAAATGCTCTTAACTCTGCTGTTCTTGATCTTCAGTCACTCTCTAATTCTAGAAATCAGAGTGGTGATTTCTCTGCTGA TACTACGACACATTCGACTACGGTTGTCGATGACCTTAAGACGCGTTTGATGAGCACTACTAAAGAGTTTAAAGATGTTCTCACCATGCGAACCGAGAAC TTGAAAGTTCATGAGAATAGGAGGCAATTGTTTTCGTCCTCTGCTTCCAAGGAATCTGCAAATCCTTTTGTCCGTCAACGTCCATTAGCTACAAGGACGT CTGCTAGTTCTTCCAATGCTCAAGCACCCCCATGGGCTAATGCTTCAGGCTCACCATCTTCGTCTCAGTTGTTTCCTAAGAAGCAGGAGGATGGGGAGAG TCAACCATTGCTGCAACAACAACAGCAACAACAGGAGATAGTTCCAGTACAAGATAGTTACATGCAAAGCAGAGCTGAAGCTCTTCATAATGTTGAGTCC ACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCTCAACAAGGAGAGGTTGCCATCAGGATTGATGAAAACATGGATGATACAT TGGCAAACGTAGAGGGGGCGCAAGGGGCATTGTTGAAGTATCTCAACGGCATATCTTCGAACAGGTGGCTGATGATCAAGATTTTCTTTGTATTGATATT TTTCCTTATGGTTTTCTTATTTTTTGTGGCATAGTCATTCTAATTACAGAGAAATGAAAAGAGAGAGCCTCTGGATTTCATTAATATTTATCCCTTCAAA ATAGCCTAGGACCAAATTTGTGAAATGAGATATTTGTATGTAGGTACATGAAACGAGGTCGTGAACAGTGTCCATTACTGATTGTCCTTTTATCTTTTTG TGATTGTCATTATACAATGGAGAGTGGAGACTATCTGCAATATTAATTATTCATGAGAAGCAATGTTTGGTTAATGTGCTCATAAGCTAATCACAGCAAA ATTAAAGAATGTATTATTTTGCAATAATATTATCTGTATCTGTAATTTATTGACACCTTTATATCTACAAATATTTGGAACAAGTTG
• Tissue: pods
• Gene name: LI_gene_162970;
• Additional information: details;

Expression of Ll_transcript_368131

FPKM

• PAB: 1.3
• PNAB: 0.3
• PS1: 0
• PS2: 0.2
• PS3: 0.6
• PW1: 0.4
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368131

• Blastp: Syntaxin-32 from Arabidopsis with 72.96% of identity
• Blastx: Syntaxin-32 from Arabidopsis with 68.67% of identity
• Eggnog: Syntaxin 5(ENOG410Y2MB)
• Kegg: Link to kegg annotations (AT3G24350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415743.1)
• Pfam: SNARE domain (PF05739.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;