| Id Trinity | TRINITY_DN48653_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_368135 |
| Sequence | AAATAAACCGACACGCTTCTTCAATAGCATTTCCAATTCCTTGGTTGGAATTCAGATCCAGGGTTTCTCTTCTCCCTTCATTCACCGATTCGAATATGAA CGTCAAATCAACGCATTCTTCGTATCGTGATCGAACTCACGAATTCGAGAGCATTGCAGAACGCTTGAAGAAATCTCGATCAGCTCCCAATTCCACCAAT TCTACTATTACCACTTCTTCTTCTTCCAGATCCGACGAACACCGATCCGCCATCGCAATTCAATCCGAGTTCAATAAGAGAGCTTCCAAGATTGGCTATG GCATTCATCAAACATCGCAGAAGCTTGCTAAACTTGCAAAGCGTAACCAATTCCATTATTCAATTCTCATTTTCATATTCTTATTATTATTGTTTATTTG TTGATAATCTGTGTTGAATGCTTTGAATTGATGTTGATTTTTGCAGTGGCGAAGAGAACATCGGTGTTTGATGACCCTACGATGGAAATACAAGAGCTGA CGGGTGTTATAAAGCAAGATATAAATGCTCTTAACTCTGCTGTTCTTGATCTTCAGTCACTCTCTAATTCTAGAAATCAGAGTGGTGATTTCTCTGCTGA TACTACGACACATTCGACTACGGTTGTCGATGACCTTAAGACGCGTTTGATGAGCACTACTAAAGAGTTTAAAGATGTTCTCACCATGCGAACCGAGAAC TTGAAAGTTCATGAGAATAGGAGGCAATTGTTTTCGTCCTCTGCTTCCAAGGAATCTGCAAATCCTTTTGTCCGTCAACGTCCATTAGCTACAAGGACGT CTGCTAGTTCTTCCAATGCTCAAGCACCCCCATGGGCTAATGCTTCAGGCTCACCATCTTCGTCTCAGTTGTTTCCTAAGTAAGTTTTGTTTTTCTCTGT TTTGTTGGGTTTAGGCATGCAGTTAATTGTGCTCTTGTTGTTTTCTTACTAATTATTCTGCATTGGAGGTAAACTAATTTGTGGGATAAGTTAAATTACT ATGTCTTTTCATAACGTTAATTTGTCATATTATGTTTGATTAGATTATTAAGTGCATAATTTTGTCCAAGAAAGTAGTGAATCTAAGGTAGTGTTTGGCA CAAGGGCAGAATAAAATGGAACAATTCATGTTCTATCCTCTTTGGTTCCGCCCTTTTAGTGGAACCAAAATGTCGCACTTGTTAACCCGTGGAACCAAAA TGCCCTTCTTGTTAACCCTCCTGTGTTGTTCTGTTATTTACTTAGATTTCTGTTATATTTATAGAAAACTCCAAACATAGAACAAAATCCACATGCTTTG CCCCATCTTGCTCTAACACGTCTTCCAAAAGCTAAGTAAGCTTGTTTAACTTGGGACTATCGAGTAAAAGTGTGGTGAGTTGTCACACATCCTTCTTTCA TTTTTTCCTTGTGTTGTTATAAGATAATTCAGTTTGCAACTTTGTATCACAACTATTTTACCAATACTGATTTCTAATCTTGAACTTTGTCTATACCTCG TTGTGATAGTATTTTGAGATTCCATTAAACAAGCCGAAGGGCAACCCCACTTTACGAATTATGTAACTCATTTGCTTAATTTAATTCGTGGACTTAAATT GATTTTGTGGTTAGAATTAGACTTCTAAACAATGAAGCCCATTTGGGCATTGGTTTGTTAGATTGGACTGGCTCAACTAAACCATGGGACTAGTGAAATA TGGCCTGGAGTGGGTCAAACAGATCACCCCAACAAAAGCTACAATTACAAAGAATGACTGGGATCCTTTTCTAATTTCTATTTAATTTTGAAAACTTTGT CACACTTCAATATTTTATGGCTGTTTCTGGTTGGGTTGAATTAATTTTGGAACTCTAGCTTTATACAGTCTTATTTTATTTTTTAATGGCCATCCACAGG AAGCAGGAGGATGGGGAGAGTCAACCATTGCTGCAACAACAACAGCAACAACAGGAGATAGTTCCAGTACAAGATAGTTACATGCAAAGCAGAGCTGAAG CTCTTCATAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCTCAACAAGGAGAGGTTGCCATCAGGATTGA TGAAAACATGGATGATACATTGGCAAACGTAGAGGGGGCGCAAGGGGCATTGTTGAAGTATCTCAACGGCATATCTTCGAACAGGTGGCTGATGATCAAG ATTTTCTTTGTATTGATATTTTTCCTTATGGTTTTCTTATTTTTTGTGGCATAGTCATTCTAATTACAGAGAAATGAAAAGAGAGAGCCTCTGGATTTCA TTAATATTTATCCCTTCAAAATAGCCTAGGACCAAATTTGTGAAATGAGATATTTGTATGTAGGTACATGAAACGAGGTCGTGAACAGTGTCCATTACTG ATTGTCCTTTTATCTTTTTGTGATTGTCATTATACAATGGAGAGTGGAGACTATCTGCAATATTAATTATTCATGAGAAGCAATGTTTGGTTAATGTGCT CATAAGCTAATCACAGCAAAATTAAAGAATGTATTATTTTGCAATAATATTATCTGTATCTGTAATTTATTGACACCTTTATATCTACAAATATTTGGAA CAAGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_162970; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368135
| Blastp | Syntaxin-32 from Arabidopsis with 75.41% of identity |
|---|---|
| Blastx | Syntaxin-32 from Arabidopsis with 65.99% of identity |
| Eggnog | Syntaxin 5(ENOG410Y2MB) |
| Kegg | Link to kegg annotations (AT3G24350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415743.1) |
| Pfam | Syntaxin (PF00804.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |