| Id Trinity | TRINITY_DN48659_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_367857 |
| Sequence | CCTAAATAACAATTGAATGGATCCTCCTCATCGTGCTATCCCTAAAATACGCCAAGTCGGATTCTTCACTCCCGGGGCCCCACCCGACCCATCTCATTCG GGTCCAACCGACCCGACTCTTGTTCCTTCTTCTTCACCCGTTTTCATCCACCTCTCCGATAACCTCCTCCTCCACTCTCGCCACCTTCCGACGCCGCAAT CCTACACCGCCGCCGATTTCTTAACTTCTCCGTTGTCCTCCGTGCCTTTGCCTTCGCCGTCGTCTGCTTCTTATTCTAGTATCATGGCGGCGGAGGGGAA GGGTGGTGGTGGAAAGGTTGCTTCGTCGTATCCACGTGGTGGATTTGATTTGAGTACGGCGATGAAGAAGAGTGGCGGTTCGGGTTAGATTGTTGTTCAG ATTTTTGATTTCAGGATTTGTTGAGTTTTGATTTGGCTTTGTTTGAATTAGTTTTGGATGAGTAGTAGTGAGGAATTTTGAGTTGAATTTGAAAATGCGT GATTAGATTTTATTATTTTTGTTATTTCTCTTTGTGCTATGCTCTCAAATATGAGGTTTAATGCATTTTGTTTTTGTGAACTTATGTATAAGAAATTAAT TCCTTTCGGGATCGAATCTTGTCCTTGGGCTTTGTACTATACTTGTGGATACAACAGGGACTTCCAAAATTGGATCAACTCCTTGTTGGTTCGATTTTCA CTTTTAGTTTGCAGGGAAATGATATGTATTTTGATACTTTTTCGCTCAAAAGTGGTTTTGGTAGAATGAAATTAGTTGTATACATTCAACGCAGTAAGGT TATTCTAGTCAGAGTAGTAGTTGAGAGGAGTTTTGATGACCACACAAGTGAAAATTTTGTTACTTCATCTTACAAAGCTATAGATAAGTGACGATGGAAT GACGGATTTTACAAAACATATATGAAGAATCAGAAACTCAGTTTTGATTTGGAGGTGTCAAATCTGTTCCATAGAAATCCAGTGTTGTATGGTAGTTAAT AGTGTGGGGGGAAAGCTATGTTCTTATAAGGAGACTAATAACAATAGTAAAGTGTGGCTTTTGATTTATGAAGTATGTACTTGAGAGAGAAAGTTAAAGA ATATTCCATTTGGTCAAGATTCTAGATAGAGACTATGATCTTGTTCTTGCAAAGTAAATTAATGAGTTTTAGAAAGGAAAGGACTCTCTTTGGATCTTGT GATTTGAATATGTCATGCACGGTTGGTGGAGACTGGAGGATCCTTGTGAGATATGATAGCCATAGGCGTATAATAAAGGGTCTTCTTTGAATCCTTTGAA TATGCTAGAACTATTATTACTTTTTAGGTAAATAGTAAATTCCATTACCTGAACATACAATACATATAAAACTTATATTGACTAGAGATGAATTGAGGTT TGATTCTATTTATTAAATGGAGTATATCTCTTTTCGCATGATGTTAGTTTCTTTTTGTTCTCTTATATTCCCCTAGTGTTGACTTTAATGCCATTCGGCA AGTTTGAACTTATGATGGATAGTTGTTGAATATGCCTGATTTGCTTGTTGTCCAAGTATGTGTGAATGTCATCTAATGAGAAAATTTGTTGTCTCCATTT ATGATCAAATTTTCTTTTCTTTATTGGTTTGAGTTTTTTGTCCATTTTCTTTTTCTTCAATCCCCAATTAGAAAAAGAAAAGTCTAACAAAGGAGGAGGG TCAGCAGAAATGAAAGACCAATTAAAACAACAGAAACCGAAAACCTCAAGAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCTGCAAAAGCTGAAG GAAATAAGGCATACGGAGATGCTACTTCAGCAAATGCAAAACCAGCTAAACCTGCAAAACCTGCACAGAAAGTTGATAATTCTGCATCAGTAGCCTCTGA GAAGAAGGCAGGTGATCCTCCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGTATGCAGTATGATGACAAGAACAGAGTTGAGAAGGCTAGACGC CGTGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTCGAGTTGTTCAGGCATTTACCACAATATGAACATGGTAGTCAGCTTCCAGATCTTGAGGCAA AGTTTTTCCATCTTGATTCTGTGCATCCCGCTGTTTATAAGGTATATTACACTGTTATTTCTGATAGTTACGATTCATGTTTATTGTAGGGCCTCCAAGA ACTTCACTAGCACTCTAGCAGTAAAATTCTGAACAGTCTTTCTGATAGGTGACATTATATGGTTTGTTGATAGTTATTCAAAATCATCTCCAGACAATGA TATAGGCTTAAGGCTTAATTTTAACCACATGGGTTATATTTCAGATGGATTGTTGTGCAACCTTCATTCCTTAGGTGCCAGTACAAGACAGAAACAAGAG GGAAGTGAAAGAAAGAGCAAGTACTAGATCATTTGCAGCAGTATAGTTTTAGAAGCTCTGAATTTGTAAATTTTCTAAGGGAAATCTGTGCAAATAGTTA GATATAGTTATCGATTCGGCTATATTGCACTGTATCACCTTACCTTATATACTATCTACTACTTAAGAAGTCAAGTTAAATGAGATCCAAATGATATTAA ATTGCCTTTATTTATATTACAATATGCTTTACTGAGTCAAATCGTGATTAAAGCTTTCATGATGTTCTAGTGGATATGACTGTGATTAGGACTTTGTTGC TGTTCTGAAAATTTGATATTTTTACATATGTTTTATCAAAGATTAATGATATAATTACAGTTTTTTCTCTTTCACTTCCTTTTACACCGCATCTTTCTAT ATCTTTCTTCCTTTTCCATCACATCTCTTTCTATCTCTTTTCCATACACCACCTACACCTAAAAAGGTGGTGCAGGATAATCATTTTCTTTTATCAAATC TTAATGATCTTCACTGTGGTTGTCAGGTGGGATTGCAGTATCTGCTTGGGGATATATCTTGTGGCAATGATCGTTGTATTGCAATGCTTGAAGCATTTCA AGAGGCCATCAAGGATTATCGGGTTCCACCTGAGAAGACTCTCGTGAGAGACTTAACAGCAAAAATAAGTAGTTATGTTTCATTCCTTATTGAGTGTAGA CCTCTTTCAATCAGCATGGGTAATGCAATTAGATTTCTCAAAAGTCGAATAGCCAAGCTACCTTTGGCCCTGTCCGACTCAGAAGCAAAAATTTCTCTTC AGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTATACTTGCCAGCAAGGTGATAGTCAAGCATGCTGTCACTAAGATAAGAGATGGTGATGTTCTTCT AACTTATGGGTCATCATTGGCAGTTGAAATGTTACTGTTACATGCACATGAGTTAGGAAAACAATTTCGTGTTGTGGTAGTTGACTCTCGTCCAAAGCTT AGAGGGAAAATTTTGCTTCGCAGGCTTGTGGAGAAAGGTCTTAGATGTACATACACTCATATAAATGCCGTTTCCTACATAATGCATGAAGTTACTCGAG TTTTTCTGGGTGCTGCATCTGTGTTGTCCAACGGAACAGTTTATTCAAGTGTTGGGGCGGCATCTGTTGCAATGGTTGCTCATGCGTTCCATGTACCTGT CATCGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTGCAGCTGGATTCAGTATGCTCGAATGAACTCGGGGATCCAGATGTCATTTCTAATGTTTTG GGTAGGGGTGATGTCAACTACTTGGATGGCTGGACCAATATCGAAAATCTGCAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAA TGATAGTCACAGATTATGGCATGGTTCCTCCTACAAGTGTGCCTGTAATTGTGAGAGAATATGGTAGAGAACAGGTCTGGATATAAATTAAGCAAACGCG GATCATCTCAATCATGTGGGCGGCGCAAAAAATTCACATTTACTGCGAATCAGCCTGGTAACATTAGATTTTAAGATTGTTGTGATGCATGTTTATGTAA CATTTTTCCTATTTTGGAATAATATAGGCATATCTGTATTTGCCTGTCTAGCAAAGATTGCCAATTTTCGCCTTACCATGCAGATTTAGCTCTGCATTTT CATTTGTAACGGTTCTTTTTTCTTGTATTGTTCAGATTTTGGATAGTTATTCAGTCACAATTTTGATGTAGAAAGTTTTTATTAATTTCTTTTCAATGTA GCTGTTTTTGTAAGTTGTGGCTGAATAATTGTGTTTCTTATCTATGGAATGAGTTTAGTTTGGTCTAGTATTTTGTTGGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_163021; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367857
| Blastp | Probable translation initiation factor eIF-2B subunit delta from Schizosaccharomyces with 47.52% of identity |
|---|---|
| Blastx | Translation initiation factor eIF-2B subunit delta from Mus with 48.87% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC21E11.06) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004513357.1) |
| Pfam | Initiation factor 2 subunit family (PF01008.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |