Ll_transcript_367850

• Id Trinity: TRINITY_DN48659_c2_g1_i3
• Name Transcript: Ll_transcript_367850
• Sequence: CCTAAATAACAATTGAATGGATCCTCCTCATCGTGCTATCCCTAAAATACGCCAAGTCGGATTCTTCACTCCCGGGGCCCCACCCGACCCATCTCATTCG GGTCCAACCGACCCGACTCTTGTTCCTTCTTCTTCACCCGTTTTCATCCACCTCTCCGATAACCTCCTCCTCCACTCTCGCCACCTTCCGACGCCGCAAT CCTACACCGCCGCCGATTTCTTAACTTCTCCGTTGTCCTCCGTGCCTTTGCCTTCGCCGTCGTCTGCTTCTTATTCTAGTATCATGGCGGCGGAGGGGAA GGGTGGTGGTGGAAAGGTTGCTTCGTCGTATCCACGTGGTGGATTTGATTTGAGTACGGCGATGAAGAAGAGTGGCGGTTCGGGTTAGATTGTTGTTCAG ATTTTTGATTTCAGGATTTGTTGAGTTTTGATTTGGCTTTGTTTGAATTAGTTTTGGATGAGTAGTAGTGAGGAATTTTGAGTTGAATTTGAAAATGCGT GATTAGATTTTATTATTTTTGTTATTTCTCTTTGTGCTATGCTCTCAAATATGAGGTTTAATGCATTTTGTTTTTGTGAACTTATGTATAAGAAATTAAT TCCTTTCGGGATCGAATCTTGTCCTTGGGCTTTGTACTATACTTGTGGATACAACAGGGACTTCCAAAATTGGATCAACTCCTTGTTGGTTCGATTTTCA CTTTTAGTTTGCAGGGAAATGATATGTATTTTGATACTTTTTCGCTCAAAAGTGGTTTTGGTAGAATGAAATTAGTTGTATACATTCAACGCAGTAAGGT TATTCTAGTCAGAGTAGTAGTTGAGAGGAGTTTTGATGACCACACAAGTGAAAATTTTGTTACTTCATCTTACAAAGCTATAGATAAGTGACGATGGAAT GACGGATTTTACAAAACATATATGAAGAATCAGAAACTCAGTTTTGATTTGGAGGTGTCAAATCTGTTCCATAGAAATCCAGTGTTGTATGGTAGTTAAT AGTGTGGGGGGAAAGCTATGTTCTTATAAGGAGACTAATAACAATAGTAAAGTGTGGCTTTTGATTTATGAAGTATGTACTTGAGAGAGAAAGTTAAAGA ATATTCCATTTGGTCAAGATTCTAGATAGAGACTATGATCTTGTTCTTGCAAAGTAAATTAATGAGTTTTAGAAAGGAAAGGACTCTCTTTGGATCTTGT GATTTGAATATGTCATGCACGGTTGGTGGAGACTGGAGGATCCTTGTGAGATATGATAGCCATAGGCGTATAATAAAGGGTCTTCTTTGAATCCTTTGAA TATGCTAGAACTATTATTACTTTTTAGGTAAATAGTAAATTCCATTACCTGAACATACAATACATATAAAACTTATATTGACTAGAGATGAATTGAGGTT TGATTCTATTTATTAAATGGAGTATATCTCTTTTCGCATGATGTTAGTTTCTTTTTGTTCTCTTATATTCCCCTAGTGTTGACTTTAATGCCATTCGGCA AGTTTGAACTTATGATGGATAGTTGTTGAATATGCCTGATTTGCTTGTTGTCCAAGTATGTGTGAATGTCATCTAATGAGAAAATTTGTTGTCTCCATTT ATGATCAAATTTTCTTTTCTTTATTGGTTTGAGTTTTTTGTCCATTTTCTTTTTCTTCAATCCCCAATTAGAAAAAGAAAAGTCTAACAAAGGAGGAGGG TCAGCAGAAATGAAAGACCAATTAAAACAACAGAAACCGAAAACCTCAAGAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCTGCAAAAGCTGAAG GAAATAAGGCATACGGAGATGCTACTTCAGCAAATGCAAAACCAGCTAAACCTGCAAAACCTGCACAGAAAGTTGATAATTCTGCATCAGTAGCCTCTGA GAAGAAGGCAGGTGATCCTCCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGTATGCAGTATGATGACAAGAACAGAGTTGAGAAGGCTAGACGC CGTGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTCGAGTTGTTCAGGCATTTACCACAATATGAACATGGTAGTCAGCTTCCAGATCTTGAGGCAA AGTTTTTCCATCTTGATTCTGTGCATCCCGCTGTTTATAAGGTGGGATTGCAGTATCTGCTTGGGGATATATCTTGTGGCAATGATCGTTGTATTGCAAT GCTTGAAGCATTTCAAGAGGCCATCAAGGATTATCGGGTTCCACCTGAGAAGACTCTCGTGAGAGACTTAACAGCAAAAATAAGTAGTTATGTTTCATTC CTTATTGAGTGTAGACCTCTTTCAATCAGCATGGGTAATGCAATTAGATTTCTCAAAAGTCGAATAGCCAAGCTACCTTTGGCCCTGTCCGACTCAGAAG CAAAAATTTCTCTTCAGTCAGATATTGAGCGTTTTATAAGTGAGAAGATTATACTTGCCAGCAAGGTGATAGTCAAGCATGCTGTCACTAAGATAAGAGA TGGTGATGTTCTTCTAACTTATGGGTCATCATTGGCAGTTGAAATGTTACTGTTACATGCACATGAGTTAGGAAAACAATTTCGTGTTGTGGTAGTTGAC TCTCGTCCAAAGCTTAGAGGGAAAATTTTGCTTCGCAGGCTTGTGGAGAAAGGTCTTAGATGTACATACACTCATATAAATGCCGTTTCCTACATAATGC ATGAAGTTACTCGAGTTTTTCTGGGTGCTGCATCTGTGTTGTCCAACGGAACAGTTTATTCAAGTGTTGGGGCGGCATCTGTTGCAATGGTTGCTCATGC GTTCCATGTACCTGTCATCGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTGCAGCTGGATTCAGTATGCTCGAATGAACTCGGGGATCCAGATGTC ATTTCTAATGTTTTGGGTAGGGGTGATGTCAACTACTTGGATGGCTGGACCAATATCGAAAATCTGCAACTTTTAAATCTGATTTATGATGCAACACCTT CAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTTCCTCCTACAAGTGTGCCTGTAATTGTGAGAGAATATGGTAGAGAACAGGTCTGGATATA AATTAAGCAAACGCGGATCATCTCAATCATGTGGGCGGCGCAAAAAATTCACATTTACTGCGAATCAGCCTGGTAACATTAGATTTTAAGATTGTTGTGA TGCATGTTTATGTAACATTTTTCCTATTTTGGAATAATATAGGCATATCTGTATTTGCCTGTCTAGCAAAGATTGCCAATTTTCGCCTTACCATGCAGAT TTAGCTCTGCATTTTCATTTGTAACGGTTCTTTTTTCTTGTATTGTTCAGATTTTGGATAGTTATTCAGTCACAATTTTGATGTAGAAAGTTTTTATTAA TTTCTTTTCAATGTAGCTGTTTTTGTAAGTTGTGGCTGAATAATTGTGTTTCTTATCTATGGAATGAGTTTAGTTTGGTCTAGTATTTTGTTGGGG
• Tissue: pods
• Gene name: LI_gene_163021;
• Additional information: details;

Expression of Ll_transcript_367850

FPKM

• PAB: 3.4
• PNAB: 6
• PS1: 4.6
• PS2: 6.4
• PS3: 6.7
• PW1: 6.3
• PW2: 10.4
• PW3: 9.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_367850

• Blastp: Translation initiation factor eIF-2B subunit delta from Rattus with 43.62% of identity
• Blastx: Translation initiation factor eIF-2B subunit delta from Mus with 47.56% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (117019)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428174.1)
• Pfam: Initiation factor 2 subunit family (PF01008.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;