| Id Trinity | TRINITY_DN48661_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_370001 |
| Sequence | AAAAAAAACGTGATATAAAAGAAATCTCTATCAGTAATTCCTTTTAAATTAGGGTTTCTCTGTGCAGCTTAGTTAGTCAATAACAAGTCCCATTCAGAGA TCCCCAACAATGGCTGAACAAACTGAGAAGGCTTTCCTTAAGCAACCAAAAGTGTTTCTGAGCTCAAAGAAATCTGGAAAGGGGAAGAGGCCTGGAAAAG GTGGCAATCGCTTTTGGAAATCCATTGGTCTTGGATTTAAGACCCCAAGGGAAGCCATTGACGGTGCTTCAATTTTTCATATTTATTTCTCTTATGTCAT TCTGTGTATCTATATTCTTATTATTTTGGATGTAGGTTTTTTCAATTAATTAATAGTAATTTTTAAAATTTGAGGATGTGAGTGTTCTTAAACTTAGTGA GTCATCTCCTTTTGGTTGTATCTGCACATCCATTGTTTTTAATTTGATAAGATGTTGCAAATCTTTGTTTTTCATGTTTGTTTTACATTGTTTGTGTGTG TTAGTGTAAGTGTAAGTGTTTTCAGAAGGCTATGAAAAATATGCATATATTTCTTAAACTATGATTATTTAAAAATATTGGCTATTTGGAGGGCTTACTT TTTTATTGTAACGGTTCTTAAACAAGCATTTCAATTAGGGAGTGAGACATACATCTATATTGTGATCAGCATTTTTCTTCTGGATCTTATTATTGGTCCA TGCATGTGCATACTCATTTATTTTATCTGAGAAAATGGACATAGTTTGATACCCTGCTTTTTTATCATGCTATAGTTGTTGGGATATAGTTGTGTTCTAG CAAACGTATTATATCTTATTCGGGCATTTCTCGTATCGTGTCATTATCTTACTGTACTACCTGTATGATATCATATGAAATGGCTAGGTGTGTATTCCTT TATATTTGTATATGGCCATTTCTGCTTCTGACCCTAGCCCTTACAGGAACCTATATTGACAAGAAGTGCCCCTTCACCGGCAATGTTTCTATCCGAGGCC GTATCTTATCAGGAACTTGTCACAGTGCTAAGATGAACAGGACAATTATTGTTAGGAGGAACTATCTTCATTTTATTAAGAAGTATCAAAGGTATGAGAA GAGACATTCAAACATCCCTGCTCATGTGTCACCCTGTTTCCGTGTGAAAGAAGGAGATCATGTTATTGTTGGCCAATGCAGACCAATCTCAAAGACAGTG AGGTTCAACGTGCTGAAAGTGATTCCAGCTGGATCTTCTGGTGGTGCCAAGAAGGCATTTACTGGAATATGAGATTTGATAACCAGTTTTTATCGAAGGA CATGGATACCTTATTAGTGAGTAGATTTGCTTTCTGGTTGGGGACTAATATAAAGTTCTGATCAAATTTTGGATTTCTTTAAGGTTCTGTTCTGTGTGGC CAAGTTTTATGAACTTTGTTAAGCATTTTGGTTCATGAATACTAGTAGTGTTTACTTTGGTACTATGCTTATGTTATTTCTGTTCTTCAAGTTTATCTAT ATTATTGCATTATTCATGAATACTCGTTTCTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_163031; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370001
| Blastp | 40S ribosomal protein S11 from Soja with 91.89% of identity |
|---|---|
| Blastx | 40S ribosomal protein S11 from Soja with 91.89% of identity |
| Eggnog | One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal(COG0186) |
| Kegg | Link to kegg annotations (547984) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441103.1) |
| Pfam | Ribosomal_S17 N-terminal (PF16205.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |