| Id Trinity | TRINITY_DN48662_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_367424 |
| Sequence | ATTTTGCTCACAAAACCAACCAAAAAAATGGCATATCCCACATTCTCCATACCCATTTCATCCCTTCCTTCAACAACCACAACAATGTTCTTCAAACAAA ACCAAAATGATCCCAATGACCCATCAACAACCCTTCTTCTCTCTTCACCCTCTTCATCTTCCTCTTCCTCTTCATTCATGCCCATCAAGCCCCTTCTTTC TAGAACCTCAAGTTTCAACAACAACACCTTTGACACCAACAATGAAAATAAGAACATCATTCATGGCCCCCCTTCTTCTTCTTCCCACCAGAACCGGAGA AGGCGCGCCGCCAGCGACGATTCTTTGTCGTCATCCGTCTCCAATGTCACTCATCAAACCAAGTCTTCATTTGGACGTGATGTTAGACATGTTGCTTCTC AGACTTTTCTCTTGACCCGCCTTGGATTGAAGATGTTAACTTACCTTGGGGTAGGCTATAAATGGATTACAAGATTTCTTGCCCTAGTTTGTTATGCACT ACTGCTTATTCCGGGCTTTGTTCAAGTTGGATATTACTATTTCTTCTCCAGTCAGATTCGCAGAAGCATAGTGTATGGAGATAAACCAAGAAATAGGCTT GATCTCTATTTGCCTAGAAATAACGATGGTCCAAAACCCGTTGTTGCTTTCGTTACTGGCGGAGCCTGGATTATCGGTTACAAAGCATGGGGTTCTCTTT TAGGTCAACAATTATCAGAAAGAGACATCATTGTAGCATGCATAGATTACAGGTGATTCTTTTTGTTCTTCCATTCTTCCGACAGTAATTTGCTTTATCA GTGTGTTAGCAGAATGGTTGCCGTGAGTGCATTCCTCCTTTATCGCAATGTTGTCCGACATCTCCTCTTGTAGAAATTTTCCTCAGGTAACCATCAGTGA TATGGTAGCTGATGCTTCTCGAGGTATATCATTTGTGTGCAACAATATTGCTGAATATGGTGGTGACCCTAACAGAATTTACCTAATGGGGCAGTCAGCT GGGGCACATATTGCTGCATGTGCACTTGTGGAGAAGGCAATGAAGGAGGCTGGTGAAGGAGAGAGTTCTTCTTGGAGTCTCTCTCAGATTAAGGCATATT TTGGTTTATCGGGAGGGTATAATTTGTATAAACTAATAGATCATTTTCACAGCAGAGGTCTTTATCGTGCCATCTTTTTAAGCATGATGGAAGGGGAGGA ATCTCTGCACCGGTTCTCGCCAGAAGTAATGGTCCAAGTTCCTAACTTTGCAAATGCTGCTTCTTTGTTACCTCCTGTAGTTCTTTTTCATGGCACTGGA GATTACTCCATACCATCAGATTCCAGTAAATCATTTAGTGAAACTCTTAAAAAAGTTGGAGTCAGAGCTGAAACAATTTTATATGAAGGGAAGACTCATA CAGATGTTTTTGTCCAGGATCCGATGAGAGGTGGCAAAGACGATTTATTTGACGATTTAGTAGCCTACATTCATGCTGGTGATGCTGAGGCCTCTGCCAA AGATGCAGCAGCTCCTCCAAGGAGACGCCTTGTACCCGAGTTCATGTTAAAATTGGCTCATATCGTCAGTCCTTTCTAGCCAGAAAACATAATATTGTTG ATTAGTTTCCGTGTACATTCATCGTGTCCGGCTAGATTACTTGTGATCATGATAGGTTTAGCAGACTATGTTGCTGCAAATTATTTCATTAGTATTTGAG GATTTAACATTTGGACTAATAGAACTATTATTTATAAATGCACTCAGATGCATGAAATTTGTATGCTAGAAGACTATAATGGTTAGGTTCAGTTAAAGAA GAATTTCATAACTTGGGCCATGTGTTCTTTTATAAACATATGAGACCCTTTGTGTATTCTATGTGAATGCTTCTGTTTGTTAGCATAGGCAAACATTGCA ATTCTATAATCTACATATTTGGCTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163041; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367424
| Blastp | Isoprenylcysteine alpha-carbonyl methylesterase ICME from Arabidopsis with 71.06% of identity |
|---|---|
| Blastx | Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 from Arabidopsis with 69.36% of identity |
| Eggnog | alpha beta hydrolase fold-3 domain protein(COG0657) |
| Kegg | Link to kegg annotations (AT5G15860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423338.1) |
| Pfam | alpha/beta hydrolase fold (PF07859.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |