Id Trinity | TRINITY_DN48662_c5_g1_i9 |
---|---|
Name Transcript | Ll_transcript_367436 |
Sequence | GTTTTATTGCAGCTGATTTGTTGAACTGAAAACCAAGTGACCCCACACATTCCATCACCCAAACTCAATCAACAATAAAGCTTTCACCTTTTTCTCTCTC TCTTTCTCTTTCTCTTTCTCTCTGAATTTTGAGTTTTTACAATGTTTTACAAAGATGGTGATAACCCATCAACTACTCTCATTATCCCTTCTTCTTCTTC TTCATTCAAAGAAAACAATACCAATACCATGAACATGGTCATGCCCATTAACCCTCTCCTTTCAAGGTCCTCAAGTTTCAACACCACCAATGACTTCAAC ACCAACAACAACACTCGAAGGCGTGCCACCAGTGCAGATTCATTGTCTTCTTTTTCTACTTCAACTCTTCCCAACTCTTCCTTTCAAACTCATCTTTCTT CGAATACCTTTGGATTCAATATCTTAACTTATCTTCGGGTAGGCTATAAATGGATTACAAGATTTCTTGCCCTTAGTTGCTATGCAGTAATGATTATACC AGGCTTTTTTCAAGTTGGATATTGCTATTTCTTCTCCAGTCAGATACGCAGAGGCATAGTCTTCGGAGATAAACCAAGAAATAAGCTTGATCTGTATTTA CCTAAAAGTAACGATGGTCCAAAACCGGTTGTTGCTTTTGTTACTGGTGGAGCCTGGACTATCGGGTATGTGATGTCCATGCTTCATTCGAAATTTGCTT ATTTTTTTCCTCTCCTATTATTAAAAGGAGAATTTCATTTATGCTGAACATCAAGCTTTGTTAAAGATGACATGTTAACACTCGGCTACTTTATGGTGGC GGTAAGAAGGCTTCAATTTATTGAGGAGCAACGGAAATTGATTGAACCGTATGATGTCTGATTAAGCTGATAAGTTGATAATGTCAAACTGAGGAGGAGT CTTGATTTCATGCTCATATTTTTTCATATTTATGACATACCAATTCAGTTCTTACAAGTTTTGAAATACTTGTATTTGTGCAGTAACAAAGCATGGGGTT CTCTTTTAGGTCAACAGTTATCCGAAAGAGACATCATTGTAGCATGCATAGATTACAGGTGATTCTTTTTGTTCTTCCATTCTTCCGACAGTAATTTGCT TTATCAGTGTGTTAGCAGAATGGTTGCCGTGAGTGCATTCCTCCTTTATCGCAATGTTGTCCGACATCTCCTCTTGTAGAAATTTTCCTCAGGTAACCAT CAGTGATATGGTAGCTGATGCTTCTCGAGGTATATCATTTGTGTGCAACAATATTGCTGAATATGGTGGTGACCCTAACAGAATTTACCTAATGGGGCAG TCAGCTGGGGCACATATTGCTGCATGTGCACTTGTGGAGAAGGCAATGAAGGAGGCTGGTGAAGGAGAGAGTTCTTCTTGGAGTCTCTCTCAGATTAAGG CATATTTTGGTTTATCGGGAGGGTATAATTTGTATAAACTAATAGATCATTTTCACAGCAGAGGTCTTTATCGTGCCATCTTTTTAAGCATGATGGAAGG GGAGGAATCTCTGCACCGGTTCTCGCCAGAAGTAATGGTCCAAGTTCCTAACTTTGCAAATGCTGCTTCTTTGTTACCTCCTGTAGTTCTTTTTCATGGC ACTGGAGATTACTCCATACCATCAGATTCCAGTAAATCATTTAGTGAAACTCTTAAAAAAGTTGGAGTCAGAGCTGAAACAATTTTATATGAAGGGAAGA CTCATACAGATGTTTTTGTCCAGGATCCGATGAGAGGTGGCAAAGACGATTTATTTGACGATTTAGTAGCCTACATTCATGCTGGTGATGCTGAGGCCTC TGCCAAAGATGCAGCAGCTCCTCCAAGGAGACGCCTTGTACCCGAGTTCATGTTAAAATTGGCTCATATCGTCAGTCCTTTCTAGCCAGAAAACATAATA TTGTTGATTAGTTTCCGTGTACATTCATCGTGTCCGGCTAGATTACTTGTGATCATGATAGGTTTAGCAGACTATGTTGCTGCAAATTATTTCATTAGTA TTTGAGGATTTAACATTTGGACTAATAGAACTATTATTTATAAATGCACTCAGATGCATGAAATTTGTATGCTAGAAGACTATAATGGTTAGGTTCAGTT AAAGAAGAATTTCATAACTTGGGCCATGTGTTCTTTTATAAACATATGAGACCCTTTGTGTATTCTATGTGAATGCTTCTGTTTGTTAGCATAGGCAAAC ATTGCAATTCTATAATCTACATATTTGGCTTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_163041; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367436
Blastp | Isoprenylcysteine alpha-carbonyl methylesterase ICME from Arabidopsis with 71.06% of identity |
---|---|
Blastx | Isoprenylcysteine alpha-carbonyl methylesterase ICME from Arabidopsis with 69.83% of identity |
Eggnog | alpha beta hydrolase fold-3 domain protein(COG0657) |
Kegg | Link to kegg annotations (AT5G15860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423337.1) |
Pfam | alpha/beta hydrolase fold (PF07859.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |