| Id Trinity | TRINITY_DN48662_c5_g8_i1 |
|---|---|
| Name Transcript | Ll_transcript_367441 |
| Sequence | TATCACAATAATATCTTACACTTCATCAATCTCAACCTCACACTATATATCTCATCTCCCATTACCTTATTACCTTCACAAAAACCCACTCTCTCTTCTC TCTCTCTCCTTCATCAATGGCTTCTCTTTCTCTTTCTCTTTCTCTTTCTATTTTTGTTTTTCATTCTTTTCTGTGAAATTCATTAACATGGTAATAAAAA CAACACCATCTTCTTCTTCTTCGTCTCCGGTTACCATATTGATATCTTCCGGAGGAGGAAGCCGAGCCAAGGGACTAGTTAATAGTACTAGTCCCTTGCC TCGTGCTTCCTTCTCCAACGATAACCATAATTCTCCTCTTAGAAGGAGAATTTCTAGTGGTGGTGGCGGTGGTGGTGGCAATAATTGCAATTCTTCTATG TCTAAAGAAGACATATCAACGACAATGGAAGAAGAATTCAATTCAGAATATGTATCATACACAGTTCATATTCCTGCTACCCCGGATCGCCAACCATTGT CAACTTCTCAAACAAGCCTCAATGAAGAAGATTGCAAGAACAACAATTGCAGCAAAAACTACATCTCAGGCACAATTTTTACTGGTGGTTTCAACTCGGT GACTCGAGGCCATGTGATTGAATGCTGCTCGATGGAGCGCGACGAGGAGCAGTTGAAATCTGAGCTTGTTTGTGGAATGAAAGGGTGTGATGAGGTTGCA ATTGAAGGAGGAAAATCAAGTTTTGTTTGTGAATGTGGGTTCAAGATTTGCAGGGATTGTTACTTGGAATGTTGTGGTGGAGAAAATAGCAAGGGAAGGT GTCCTGGTTGTAAAGAACCTTACAATTACGCGAGCGATGATGACAATGATGATGATGAAGAGCGAAATTCCGAGGTGGGAGATAAGGCCTTGCCATTACC TTCAATGGCTGAGTTCAAATTGGATAAGAGGCTTTCAGTTGTGAAGTCATTTAAGGCACAAAATCATCCACCTGATTTTGATCACACTCGATGGCTATTT GAAACCAAGGGTACTTATGGCTATGGAAATGCAGTGTGGCCTAAAGATGGTTATGGTGCTGGATCTGGTGCTAATGGATTCGAAGACCCTCCGGATTTCG GAGAGAAAGCTAGGAGACCCTTGACTAGAAAAGTTGGAGTTTCAGCTGCAATTATCAGTCCATATAGGTTACTTATTTTGATGCGTCTTGCCGCATTGGG ATTATTTCTTACATGGAGGATTAGACACCCGAATCGTGAAGCAATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTTTGGTTTGCATTTTCATGGCTA CTTGATCAGCTTCCTAAGCTCTGTCCTGTGAATAGAGTCACTGATCTCTCTGTTCTGAAAGAGCGGTTTGAGTCCCCGAACCTTCGCAACCCGAAAGGGA GGTCAGATCTCCCAGGAATTGATGTTTTTGTTTCCACAGCAGACCCTGAAAAGGAGCCTCCTCTTGTTACTGCAAACACAATTCTTTCCATCCTCGCAGT CGATTATCCAGTGGAGAAGGTTGCATGTTACTTGTCTGATGATGGTGGAGCATTATTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGAGTA TGGGTTCCTTTCTGTAGAAAGCACCAAATAGAGCCTAGAAATCCCGAAGCATATTTCGGGCAGAAGCGCGATTTTCTCAAGAACAAGGTCCGGTTAGACT TCGTGAGGGAAAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTGAGGGTAAATTCCTTACCTGAATCCATAAGGAGAAGATCTGATGCCTATAA TGCTCATGAAGAGTTAAGAGCTAAGAAGAAACAGATGGAAAATGGTTCCGATGTCTCCGAACCCATTAAGGTTCCTAAAGCAACATGGATGTCTGATGGT TCTCATTGGCCTGGAACTTGGGCATCAGCAGAACCAGACCACTCCAGAGGAGACCATGCTGGCATTATTCAGGCAATGTTAGCTCCCCCAAATGTGGAGC CTGAATTTGGTGCAGAAGTTGATGCAGAGAACTTGATTGATACCACAGATGTTGATGTTAGATTACCAATGCTTGTTTATGTGTCTCGAGAGAAGAGGCC TGGATATGATCATAACAAGAAAGCAGGAGCAATGAATGCTCTTGTTCGCACAAGTGCCATCATGTCTAATGGACCATTCATTCTGAATCTTGACTGTGAT CATTACATCTACAACTCCTTGGCTATGAGGGAAGGTATGTGCTTTATGCTTGACCGAGGTGGTGATAGAATATGTTATGTTCAGTTCCCTCAAAGGTTTG AAGGCATTGACCCCAGTGATCGATATGCAAACCACAATACAGTATTCTTCGATGTGAGCATGAGAGCTCTTGATGGCTTACAAGGCCCAATGTATGTTGG AACCGGTTGCATATTCAGAAGAACGGCTCTTTATGGATTTAGTCCTCCTAGAGCTACAGAACATCATGGTTGGTTCGGCCGGAAGAAAATTAAGTTGTTA TTGAGACGGCCTATTGTGTCAAAGAAGCAAGAAGATGAAGTAGTTGTGCCAATCAATGGTGATCCCAATGATGATGATGCTGACATTGAGTCTTTGCTTC TTCCGAAAAGGTTTGGGAATTCTACTTCTCTAGCCGCATCCATTCCAGTAGCAGAATATCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACA AGGAAGGCCTGCAGGTTCTCTTGCTGTGCCTAGAGAACCATTAGATGCTGCTACTGTTGCAGAGGCAATAAGTGTGATATCTTGTTTCTATGAGGATAAA ACTGAGTGGGGCAAAAGAGTAGGATGGATATATGGTTCTGTTACCGAAGATGTGGTGACTGGCTACAGGATGCACAATAGAGGGTGGAGATCTGTATATT GTGTGACCAAAAGGGATGCTTTTAGAGGAACTGCTCCAATCAATTTGACAGACAGGCTCCACCAAGTGCTCCGGTGGGCGACCGGATCCGTTGAGATCTT CTTCTCAAGGAACAATGCATTATTGGCTAGTCCTAGAATGAAGTTCTTGCAGAGGGTAGCATACTTCAATGTGGGAATGTACCCTTTCACTTCAATGTTC TTGATTGTGTATTGCTTTCTGCCTGCAGTGTCCTTAATTTCCGGGCAGTTTATAGTCTCAACTCTCAGTGTAACTTTTCTAGTGTTCTTGCTAGGCATTA CAATCACACTTTGTTTGCTTGCGTTGCTTGAGATCAAGTGGTCAGGAATCACGTTACACGATTGGTGGCGAAACGAGCAGTTCTGGTTAATCGGTGGAAC AAGTGCCCATCCAGCTGCTGTTTTACAAGGATTGTTGAAGGTCATAGCTGGAGTAGACATCTCATTCACCCTTACATCAAAGTCAGCCACTCCAGAAGAC GGAGACGACGAATTCGCAGATCTTTACGTCGTAAAATGGAGCTTTCTAATGATGCCTCCGATTATAATTATAATGGTTAACATGATTGCCATTGCTGTTG GTGTAGCAAGGACTATGTATAGCCCCTTTCCACAATGGAGCAAGCTAGTAGGAGGTGTGTTCTTCAGTTTCTGGGTTCTATGCCATCTTTTCCCGTTTGC AAAAGGGTTGATGGGAAGAAGAGGAAAAGTTCCAACCATAGTTTATGTTTGGTCTGGTTTGCTCTCAATTATTATCTCTTTGCTTTGGGTCTATATATGC CCTCCTTCTGGAACACAACAAGATTACATGAATTTTCAGTTCCCTTGAAACCTTAGTTTGAGGAAATATGAGTTTCCTCTAGTACACAACACTTCATCAT TGTGAAAATCTTGTGTAGTCTAGGTTCTAGTGTGTCTATGTTGTATTAAACTAGTCTATGTTATATCTTACATTCTGCTATTCTGATCATGTGTAAGCAC TTTACATGTGCTGTGTTATTTGGAAAAAAATATTCAAGTTGCAAACTTCATGCTGTAGTATTATTGATGGTAGCACATTTATTAATGTGACTTTATACTA TTGACTGTCATTCACTGTGTATAAGCCATAAGAAAAAATATCATTGTCTAATTGATTAGAGTTACACAATTATCTTGGTCACACTTTGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_163048; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367441
| Blastp | Cellulose synthase-like protein D5 from Arabidopsis with 79.58% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein D5 from Arabidopsis with 79.92% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT1G02730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421902.1) |
| Pfam | RING/Ubox like zinc-binding domain (PF14570.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |