| Id Trinity | TRINITY_DN48668_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_370211 |
| Sequence | ATAATGTTCAGTTGTTGAGGCAGTCTTGGTTATATGCCGTACCATGAGAGGGTGTGATGTGATATTACTGTGGATGCATACTGTTCAGACTAACAAACCC ACAAAGTCACAAACACAATACAAACACTGAACATTCTTCTCATTTCTTTCCTTTTCTCCCTCAAGCTCGAAACTTGAAGGTTTTTCAGATACCCTTTTCC CCTAATTATAGTAAAGTTTGATCCTTTTTTGTTTTTACGTGAAGAAAATAATCTCTATAGATTTGAGGGTGTACTAGGAATTGGGAAGTGGGTATGTTTA TGGTAGAGGGTGATGATCAATTCTATGATACCCGTGAGGAATTGTGTTCTGTCTCAGATGTGGATTCAGATTGCTCTGAAGCCAATGAATCTAGTTCTGG GAATGGATTTGTTACTGGTTACCATGTTTGGACAAATAATCTCCAAAGTGTTCATCTGAGACGCCTCAATTTCATAAGATGGATGGGTTTAGAGTCAGAT TCTGATGCGGAGTTGACAGATTCATCTTGTGGAGTTGCCCGAATTACTGCGGGCAGTAGAGCATTGCAGAGAAGTTTGGGTGTTGTAGATGGCTCGAGCC TGACTGTGTCGAATTCTTTATCTAACGAAACCTGTATTATAGAAAACTGTGGTGTTGAGGATGAGAATCTGGCGCGTACTATAAAGAATTTGGATGATGG GACACAGTATGTTGTTGATAAATTGAGTTCAGATGGAACACTTAGAACGCTGCGTGTTGTTGGTTCTGACCAATCGATTAGCTTGGAAGAGTTTCAGAGA ACTATTACGCCAGCGCCACTGCTTTGGAGACATTTGCAGAGAGATGCCGAGAACACAAGAGTTTTGAGTGCGAAAAAGAAAATGAAGAAGGATTGGCTAA AGAAATTGGGTTCGGCGGCTTGTGTTGTTCCTGGTCAAGAGCTTGATGATATGGACGGCAAAGACATTGATTCAGTCAATAGAAGTAGAATACAGAGAGT TAGAGTTCATTCGTTTAGGAAGCGAATCAAGGAGCTTACCTCCCTTCACACTGAACAGGAGTTCAAAGCACATAAGGGTGTTATTTTGACCATGAAGTTC AGTTTTGATGGAAAATACCTTGCTACAGGTGGTGAAGATGGCATTGTATGTGTGTGGAAGGTGGTTGAGGGTGAAAGATCAAGTAAATTTGAGATTCTTG ACCATGATCCATTAAGTACATATTTCAAAATAAATAGTTTCTCATGCTTATATCCGATGGATGTAGACAAAGAGAATTCAGTTAAAAAAGACAAGTTGAA GAGATCGTCTAGTTCGACCTGTGTGATTATCCCGCCAAAGACCTTCCGTATATCGGAGAAACCTTTGCATGTGTTCCATGGGCACAAAGGAGACATTTTG GACCTTGCATGGTCCAAAAGAGGGGTTAGTTTCCCAAAGAAGAAATCTGCATTTTTTAATTTTATATCACACTATCTTTTGATTTGATTAGTATTTCATT TTGTGCACCTAAACGGAACATAATTGTTTAATTTTTTTCCTAAGTTGCAGTTTGTACTTTCATCCTCAGTCGATAAGACAGTACGCCTATGGCAAGTAGG AATTGACAGATGCCTTAGAGTTTTTTCCCACAATAATTATGTGACATGTGTCAATTTCAACCCTGTCAATGATAAAATTTTCATCAGTGGTTCAATTGAT GGGAAAGTTCGCATCTGGGAAGTTCTTTGCTGCCGGGTTGTTGATTACATTAATATCAGAGAGATTGTCACTGCTGTGTGTTTCCGCCCGGATGGGAAGG GCACAATTGTGGGTACGATGACAGGCAATTGCCGTTTTTACGGTATCGAAGATAATCATTTACAATTGGATGCTCAATTACTCATAGGAGGCAAAAAGAA GACACCGGGAAAAAGGATCACTAGCTTGCAGTTTTCACCAAATGACCCAAGCAAATTGCTGGTTGCTTCTGCTGATTCACATGTCTGTATACTTTCTGGA GTTGATATCATCTACAAATTCAAGGGCCTTAGAAGTGCAGGTCAGATGCATGCTTCATTCACCTCTGATGGGAAACACATTGTCTCAGTTAGTGAGGATT CAAATGTGTGTATCTGGAATTACACTGGCCAGGATAGGAGTACTTCCAAAGCCAAGAAGATTTGGTCTTCCGAGAGTTTTCTATCCGACAAAGCAGCAAT TGCTATACCTTGGTGTGGCATTGAATCAAAGCCAGGAACACTCTTGTCGCCGTCGCTGAAGCATGATTTCAGTCAGAGGTTAACTCCGTCTTCGCATGAT CGTTCCTTCTTGAACCGTGGATTCCTATCAGAGTTAGTTCCAAAGGCTTCTCCAACCTGGCCGGCGGAGACACTTGAGGGCTCAAGCCGAAGCTTTGTTA CTCCTACAATGTGTAAATCCGAGTACAAGTTCTTGAGAAATGCTTGCAAGGGAATGTCTAATTCTAACTTATGGGGCCAGGTGATTGTAACAGCAGGATG GGATGGACACATAAGAGTATACCAGAATTACGGGTTACCGGTTCGTGATTGAAACCAAGGCTAATGTTCATTTAAATTAGTGAATTTCTATGCTCACTAA GCAGTACAGTATTCTTGGAAGAAAGGAATTTGCTACATTGTAAAGTAAAGCTTCATCTTTTTTGCAAGTGTAATAATATACAGCAGCAACATGGGTGACT GAGAATTGCCCTTACATAATATATTCCTTATAGAAGGCCAATATTAACAATTTGATTCTTTAAGTTTTAGGGACTATAAGTTGATACAATGTGAGTTTTA TTTTTGCTGATGATCTTGGTTGAAATGTAATTTATAATATAAGTGTGCATAGTATATAGAAAGATTTCATTCAATTTTCATGTATACAAGAAAGAGGTCA CCCTAGACGTAACCGTAAGGTTATTTGTTTTATGATCTAGAGATAATTAATGTATTTAAATCTTAAAACTGTTTTGTTGCTTACGACTTACAAGGATAAG ACTGTGTACATATATACTATTTCCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_163108; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370211
| Blastp | Uncharacterized WD repeat-containing protein C3H5.08c from Schizosaccharomyces with 30.43% of identity |
|---|---|
| Blastx | WD repeat-containing protein 44 from Bos with 31.11% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC3H5.08c) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422019.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |