Ll_transcript_370218

• Id Trinity: TRINITY_DN48668_c5_g1_i8
• Name Transcript: Ll_transcript_370218
• Sequence: GTATGGTTCAGTTTAGGAAGCCTTGTTTTTGTACCTTACCAGAATTGGTTGTGGTTAGTTATGTCTGTGATGCATAGTTCAGACAAACATAAAGCCACAA ACAGTGAAGATCTCTTTCATAGTATCATTTCTTTCCATCAAACTCAAAACTTGAAGCTGACCCACCTCTGCAAACATCTCCTATTTCGGTTCCCCAATCT TCTGTTTTATCCACTTCATGCTTCAAATCTGTTTTTCCTTCTTCATGTGAGGTAGACTCATAAATGGTTTCTGGTTCATGTTTCATCATCCTTGAAGCTG TTTCAGATACCCTTTTCCTCAAATTAAAGTAAAGTTTATTCCTTTTTTTGTTTTCTGTGAAGAAAGGAATCTCTATTGATTTGAGGGTATAGTGAGAATT GGGAAAAGGAAGAGGGGTAGGGTATGGTTATGGTTATGGAAGATGGTGATGATCAATTCTATGATAGTTGCGAGGAGTTGTGTTCTGTCTCTGATGTGAA TTCAGATTCCTTAGAAGCAAATGAATCTAGTGATGCTAATGGATATGTTACTAGGTATCAGGTTTGGACAAATAATCTTGAAAGTGTTCATCTGAGACGC CTCAATTTCATAAGATGGATGGGTTTAGAGGCTGGTTCTGATATGAATTTAATGATGGGAAGTGAGGAGTTGGTAGATCCATCTTGTGGAGTTGACCGAA TCACTGCAACCAATGGAGCAGTGCTGAGAACTTCAGGTTCTGTAGACAGGTCAAGCCGGACTGTCTCGAATTCTTTGTCTAATGAGGCCGCAATTATCGA AAATCACGGTGTTGGGGAGAATTTGGCATGTATGATAGATAATTTGGATGATGGAACACAGTTAGTTATTGATAAATTGGGTCAGGATGGAAAGCTTAGC ACGCCGCATGTTGTGGCTTCTAACCAATTCACTAACTTGGAAGAGTTTCAGAGAACTATTGTGCCAACACCATTGGTTCGGAGACATTTGCTGAGAGATG CGGAGAACTCAAATTTTTTTGGTGGTGTGAAAAAGAAAATGAAGTGGGATTGGCTAAAGAAATTGAGTTTGGTGACTTGTTTTGTTCATGATCAACGGCT TGATGAAATGGACGGCAAAGACTTCGATTCAATAGATAGAAATAAAATACAGAGAGTTACAGTTCATTCATATATGAAGCGAATTAAGGAGCTTACCTCC CTTCACATTGAACAGGATTTCAAAGCACATAAGGGCGTTATTTTGACTATGAAGTTCAGTCTCGATGGAAAATATCTGGCCAGCGGTGGTGAAGATGGCA TTGTACATGTGTGGAAGGTGGTTGAGGATGAAAGATCAGCTAAATTGGACATTGTGGACAATAATCCATCAACTACATATTTCAAAATGAATAGTTTTTC ATGTCTAGCTCCCATGGATATGGACAAAGATAAATTAGTTGACACAGACAAGGTGAAGAGATCGTCTGGTTCAACCTGTGTGATTATCCCGCCAAAGACC TTCCGTATATCGGAGAAACCTTTGCATGAGTTCCACGGGCATAATGGCGACATTTTAGACCTTGCATGGTCCAAAAGAGGGTTTATACTATCATCCTCAG TTGATAAGACAGTGCGCCTATGGCAAGTAGGAATTGACAGATGCCTTAGAGTTTTTTCCCACAATAATTATGTGACATGTGTCAATTTCAATCCTGCAAA TGATAATTTTTTCGTCAGTGGTTCAATTGATGGGAAAGTTCGCATCTGGGAAGTCCTTTGCTGTCGAGTCGTTGATTACATTAATATCAGAGAGATAGTC ACTGCTGTTTGTTTCCGCCCTGATGGGAAGGGCACAATTGTGGGTACCATGACAGGCAATTGCCGTTTTTACGATATCAAAGATAATCATCTACAATCGG ATGCTCAATTAAGCTTAGGAGGGAAAAAGAAGACACCGGGGAAAAGGATCACTAGCTTGCAGTTTTCACCAAATGACCCAAGCAAGTTGTTGGTTGCTTC TGCTGATTCACATGTCTGTATACTTTCTGGAGTTGATATCATCTACAAATTCAAGGGCCTTAGAAGTGCTGGTCAAATGCATGCTTCATTTACCTCTGAC GCAAAACACATTGTCTCAGTTAGCGAGGACTCAAATGTTTCTATATGGAACTATACTGGCCAGGATAGGAGTGCTTCCAAAGCCAAGAAGATTTGGTCTT CTGAGAGTTTTCTATCCCACAAAGCAGCAATTGCTATACCTTGGTGTGGCATTGAATCAATACCATCACTGAAGCATGATTTCAACCAGAGGTTAACTCT GTCTTCGCCCGATTGTTTCTTCTTGAACTGCGGATTTTTGTCAGAGTTAGTCCCAAAGGTTTCTCCAACCTGGCCCGAGGAGACACGCCTGGACTCAAGA CAAAGTTCTGTTACTCCTACGATGTGTAAATCCGATTACAAGTTTTTGAGAAGTGCTTGCAAGGGGATGTCTAATTCTCACATGTGGGGCCAAGTGATTG TAACAGCAGGATGGGATGGACACATAAGGGTGTACCAGAATTACGGGTTACCAGTTCGTGTTTGAAACCGAGGCTTGTTCATTTAAATTTAGCGACTTGC TATGCTCGCGAAGCAATACATGGTTGGACATTGGAAGAAAGCATTTTGCTGCATTGCAAAGCTTCATTGTTTGCAAGTGTAATGATAGTACAGCAGCCAG GGCAATTCTTTTGCATAGGCGACTTGGGATTACACTCTCATACTATATTCTTTATACAAAGTCAATATTAAACATATGATTCTTTAAATTTTTATGATCC TTGTTGAAATGTAATGTATGATCACAATGTGTATAGTATATAGAAAGATATTATTCAATTTTTAATGTATACAATAAATTTTGTTAGCATGAATGTAGGA AAGGATTGACTATTGTTGCCTGATACTGCCATTGAACTTTGGCCTTAGAAAAGTCAATAGTTGAATTAGTGATAGAATAAGTTACTAGCTAGTAGCTACT TAGGGTGTAGTTTGTTTTTGCATCGTATATTAAAAGAATGTAATATCTATAAATTTATATACAGTCAATACATCATCCACCGTTTTTTATAGACAGTTGA CTGTAAAACTTACACATTATACTGTCAGTGCATACATTTTATATGATTGCGGGGCCGTGATAGTCTCGGCGGACCCAGATTTAAAACCTTGATAAGGGTT TTAGCTTTGAGATTTTAATTATTTTGGGCAAAATTTATTATTAGGGTTACTGAGCTTTTGAAGATGTATTTCAGAGCTTCTGTTTCTTATGTTGGCCTTT TTTGTTTCAAATATACAGATATGATCTTTGGGGAATACTTCAATGCTGTCCATTTCTCGCTCGATTTGAGTAAAAGAAGGTCGGCCCAATACAGGAGGTT TCTGGGGAGGATAGATGTACGCAGCCTGCGAGTGGAGAGACTGTTTCTAGGATTTGAATCCGTGACCTCGTGGTCACTAAGCAACAACCTTAC
• Tissue: pods
• Gene name: LI_gene_163108;
• Additional information: details;

Expression of Ll_transcript_370218

FPKM

• PAB: 4.8
• PNAB: 2.5
• PS1: 2.3
• PS2: 1.1
• PS3: 1.8
• PW1: 3.2
• PW2: 4.2
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_370218

• Blastp: Uncharacterized WD repeat-containing protein C3H5.08c from Schizosaccharomyces with 30.6% of identity
• Blastx: Uncharacterized WD repeat-containing protein C3H5.08c from Schizosaccharomyces with 33.44% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC3H5.08c)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446471.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;