Ll_transcript_369141

• Id Trinity: TRINITY_DN48676_c3_g1_i3
• Name Transcript: Ll_transcript_369141
• Sequence: TTTGAATTGTGAAGGTCTGTTTTGTGAAAAAAGCTGCTTAGGGTGATGGTTAAACCTCATGAACTCATACCCTTCTACGCTTCTCTTCTTGATTCTTGCA CTTCTTCTACAAAGCACTTACAAGTTCTCAAGCAAATCCACACCCAAACCATAACTCTAGGAATTTCAACCCATGACTTCATTCGAACCAAGCTCATCTA TTCTTACGCTTCTTTTGCACAGTTACACCAAGCTAATACCCTTTTCTCTGTTACCAATCGCAAACCCACTTTCCTCTTCAATTCCCTCATCAGAGCCTAT TCTTCTCTCAACTTATTCTCCCACTCCCTCTCCATCTTCCAAAGCATGGTTCTTTCCGGCAAAAGCTTTGATCGCCATACTTTACCAGTGGTGCTTAAAT CTTGTGCTGGTTTATCGGCTCTGTGGATTGGTAAACAGGTCCATGGAGCTGTTATTGTTAATGGGTATGCGTTAGATCTGGCAAATTTGAATGCTTTGAT AAGCATGTACGCTAAGTGTGGCGATTTAGCATGTGCGCGCAAAGTGTTTGATGAAATGTGTGAGAGGAATCAGGTGACGTGGTCAACGATGATGGCAGGT TATGGAATGAATGGCATGTTTGAGGAGATTTTTGAGTTGTTTGATAAGATGGTGGAGGAAGGAGGGAGGCCGGATGGTGTGACTTTTACGACGGTGTTGA ATGCGTGTAGTCATGGTGGCTTTGTGGATAAGGGAAGGGCATGTTTTGAGATGATGGAGGTGAGATTTGGGGTGAAACCTGGGCTGATACATTATACATG TATGGTGGATTTGTTGGGGAGGGTTGGTTTGGTGGAGGAAGCGGAGAAGCTGATTTCGAGAATGGATGTTGAGCCTGATGATGCTTTGTGGCGTGCCTTG TTAGGGGCATGTAAAACTCATGGGAAGTTTGAGGTTGCTGAGAGAGTTTCAGAGAGGGTTTGTAGGAAGGAACTCATCAGTTTTGCTTCCTAACTTTTGA AATTATTCTACATTGTATTTGATCATGAGAGACAAAGCATGGGTCTAAAAGACAAGCATGTTCATGTACCTTGCTTGGTCATACTTCTTCCAGTGATTTA AATTGTGGGCTGCATCATGTGATACGGCCATAATATCACCACAACTACATCTCACTGTAACCACTGTAAATCCGTAACGACCGTAATCACAATGACCACA GCCATTACTGTAATCGTGAACCCTCAACCGCAGTAAAAAATACTGCTTCATTCTTTCATATGGGTTCTTTCTTCCTCTGGGGATATAATCTGATACTCAA TGGCAAATTATCTATGTCATCCAAATTTATTCTTTATTTTAATGTTTTAAGATTGGTTTACATATAAAAGAAAAAAGTACATTTGTACAATCAATCACTT TTTAAACTCAGTAATACTGTTAACAAGTTGTGTTGATTTTCTATGCAATTACAAAATTCAATCATCCTCATCGATTTCCTCAAGGGAAATGAGAATCATA GCCACATAATTGTAGTTGAAAGCACAGAAGCTCCAACAGTGTAAATATCCTGTTCTCCTCATGAGACGATTTCCTTAAATTTCGGGTTGTAAACTTGTAA TCATTGCAGAGGATGGAGAGGAAGAAGAAAAGTGAGGATTGAGGATTTTTTGTGTGTTTAGTCCCTGCTGTATGTCATGTATCAGTGTTGGAGTGGCCAA CCTTCCAACACTTGACTGAAAGTTAGAACAACTTGATGAAGAAACTGTGTTTGAAGCGAATTGGTTGATGAGCAATGTGTATTTGGGTTTCCAAGAACAA AAGTGATTCATGCAACTACAGAAGAGAATACGAGCTTACAAACAGATTAGACTGATCAGGTTTATGGTCTGCCGCCTTCAGTTTATTGTTTTTGACCTAT GCTGAGAGATTAAAAACATAAAATTGCAGAGATTTAGAGAATGATGAATGGGCTATAGATGCTGGCATGCTGCTACTTAAGCCATCCAAAAGCTGCTCGA GATTGAGAAAACAAGCTTGCATCCTAATGAGTCTGTAGTTACCATGGAAGAGGAACGGAATCGACCAATCCGCATATGCATGTAAGTTCTCCGACGAAAA TTATATAAGTTCTTCAAAGAATGTAGATGCAGATGAACATGAGGTTGCCAAAGATGATTTAGAAGTTGCTATTGATACACAAACTGCTTCAATAATGAAG AGAGGTCATGTTGATGCAGACACTTTAAATTTGTGAGAAACAATATGTTGTTCTTATTTTATATAAAGTTGTAATAAATTATAAAATAATATGTGAGACC CAAATAAGAATAAAGATTGTATTC
• Tissue: pods
• Gene name: LI_gene_163173;
• Additional information: details;

Expression of Ll_transcript_369141

FPKM

• PAB: 1.4
• PNAB: 1
• PS1: 1
• PS2: 0.7
• PS3: 1.2
• PW1: 0.6
• PW2: 1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_369141

• Blastp: Pentatricopeptide repeat-containing protein At3g46790, chloroplastic from Arabidopsis with 36.33% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g46790, chloroplastic from Arabidopsis with 36.33% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G46790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440978.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;