Id Trinity | TRINITY_DN48677_c2_g1_i3 |
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Name Transcript | Ll_transcript_369413 |
Sequence | CGTGGATGGATGTTTTCCCTCGCCATAGCAACAAAATCGATACGTTAATTATCCAAAATTAAAATTACTCTCCTATCCTTCTCATCCCTGATTTTCAACC AATCTTCATCACCATTCTTAAAACACAACGAATCATTCAAATCAGAAAAACTGAGCAGAACCAAAACACGCACCCAACTCTCACGCGCCACCACAATTAT CAAAATCCTCCAAAATGGAACAACCGCCGCCGGAACCTGAGCGCAAACCTAATCCAAAGGATTCATCTCATGCTCCAAATGGAGAAGCTGTAGAGAAGGT ATCACATGGATCGGAATCTCAATCCTCGCCGGAGATATCGACGGAGCGCACTGCCTCACCCCGTACTGCGAAGAAATCCGTGCGTTGGAGCCCCGATCTG GTGACCGAATCAACGTTCGATTCGACTCCGAAAGAATCGCAATCCAATCCCTATTTTTATTATTCTTTTTCTTCTACTGCTTCTTCTTCCTCTGTCTCGG AGAAGGTTGATATTGTAAAGAATGTGCTGGGAAGATGGGGAAGAAAGGTGGGAGAAGCAACACGCAAAGCTGAGACTCTCGCTGGAAACACGTGGCAGCA CTGTAAGTTTTTTTGTTCAATTCATTAACTTATTGATTCACATTGAACCGTGATTACATTTGATTAGTGACATTAGTCTGTTATGGGAATCTGGAAGCGT GAAAGTAATTTAGGTATTTGTAAGATGAATGAGTCCTTTTAACATGTACGTGTAGGTTAACCTGATCTATCATGCATGAATTCTTTCTAATTGAAATTAC TCAGATTTTGCAATGAAGGTAATGTTAGATTTAGAGTCATGTGAATTCGTGCTTGACATTGATTATGGACCCGTCTGTTTAGTTTTTTTCTTCTTATTTT TTATATAAAAAATCATTTCTAACATTATATGCTTGTTTGGTTGTGGTTTACCACATACTAAATGTTTTATCTTGCAAGAAAGCTAAAATATAGCTCTTGA AATCCAGCTTCTCACAAAAAATGTTCTTTGAAATTCACATTTTGTGAACCCTAAGGGTTAGTTTGAGAGTTGGATTTCGGAGTGAAGGAAAGAAAAGGTA AGGCTTGGAAGCCATGAAATACACTTGTGAGTTGACTCTCAAACCTTCTATTCCCCTCCAAAATCTAACTCCTGGGCTAACCCTAAACAAATAGGCCGTA TGTTATGTATCCATCAGAAATGTTTACATGGAGATTATACAGCTTCTATTGCCTTTAGCTTTAAGTCCCGTTTAAAGTGTATGCGTGACACTTCTGTGGG TGAAGTCATTGGTAATAATGTGATTCATTCTTGATTTGCTTATGCATATCCCTTAGATGGTCTTTGATATTTGTATTATTTTGGGTATACCTGTTTTCAT ATCTTCTAGATTGTTTTCAGAGTCTTTTTAGAAATATTTAAGTTTTGTCATAAACATTATTTCAGAGTCTTTTAGAAATAATTGTAGATGCTCTTTCATC TGTCGTATAACTTCTTCATTTGTTCAGCATTTCCTCAAGGTATGTTTGGATGGAGGGGTTTCGAGGGAAAGGGAATGGAGGCTTGGATGGTTTATTTTTA TTTTTGTGCAAACATTCTCCTTAGTTGACAGTTTTTTTAGAACAAAAGGAATGACATGAGAGATTATGATGTAACCTTCAATAATCTTTTATTCATTTTT ATAAATATCTCGATTCAGAAACAAAAGGTTACCTTCCTCTTCATTTCTCTCCAAACTGCGCCATCAAAACATACCCTTAATGTTGATATCGTCATCACAA CCAGTGGCCCTGTTAAGCATTGTCTTTTCCTTCTTTCTCTTAATGATCAGTGTAGGTTAATGGTCTTATGTCTCTATTATTTTCTACCCTCTCATCATTC TTGATGACATTGAGTCTTCTATAGAACATAACTTGCCTTTTCCAATTTCATTGTGTTAAGTGAAAACGAACCCTAGTTTTGCTGAAGCTGCTATGGGAAG AATTGCCCAGGGAACAAAGGTTCTTGCAGAAGGTGGCTATGAGAAAATTTTCCTACGGACATTTGACACAGTTTCAGGGGAACATCTTCAAAATTCTTTT GCTTGTTATCTGTCCACGTCAGCTGGTCCAGTAATGGGAGTTGTGTATATATCCACAGCAAAGCTTGCATACTGTAGTGACAATCCTCTGTCCTATAAAA CTGATGACCAAACAGAATGGAGCTATTATAAGGTAGTCATCCCATTACATCAGTTAAAAGCAGTTAATCCTTCATCAAGCAGAGTCAATCCTGCTGAAAA GTACATCCAGGTGATCTCTGCGGACAATCATGAATTTTGGTTTATGGGCTTCTTGAACTATGAAAGTGCTGTGGAATGCCTGCAAAAAGCTTTTGAAGCC AACTAATTACAATCTGAATAATAGTCTGTCTATATGGTTTTGGCCTTCACCCCCAAATACCTGTGCATCTTGGTACAATAGTTATACTTATCCTGAGCAG AATCCTGCTCCTTTCAAAATTTTGGCAATTTTTTTGGATGTGAATTAGTTATAGGATTCATAATATGGAAGACCGGGTCATTTGAGGGAATCCCTTAGAA ATTTTAGAAAACTATGTTAACATTCTTGTACTCCCCTATGCTATTGTTCACATTTGAACTTTTTGCTTACTATGTGCTAAATCAGAATGTCTCACATGTT TTTCCTTCTGCTAAGCCTGGACGTTTATTTATTCGTTAAAGCTAGATCTAGTTTGCACCTTAGCATGATTGTAGAATGAATGGCGCGAAGGCCTGTAACC GGGTGATTTTATTTTATCACTGCCCAGTGTCTGTGTTTCTATGGAGTAGGGGTAGAGGCCAATTGGATTTGCCTTTTGTTGCCAAGTATTTTATTTTGTT CTCACAAGTATCCTCGCACCGGAGGCAATTCTGTCCGAGCCGGGAACATTCACAGGTATGTGGGGCTAACTCTCCCAGTGGTTATTTTTTTCATCCACAA AGATCGAATCCGAGâBLAST |
Tissue | pods |
Gene name | LI_gene_163191; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369413
Blastp | GLABRA2 expression modulator from Arabidopsis with 81.62% of identity |
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Blastx | GLABRA2 expression modulator from Arabidopsis with 78.95% of identity |
Eggnog | GRAM(ENOG410YEXI) |
Kegg | Link to kegg annotations (AT2G22475) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424498.1) |
Pfam | GRAM domain (PF02893.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |