Id Trinity | TRINITY_DN48681_c0_g1_i10 |
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Name Transcript | Ll_transcript_367588 |
Sequence | AAACAAGCCCTTATCATCATAACTCTATCTAATCTTATTATTACACACACCCAACGTAATCAAGCTTCTGTGACTCTCATATCAAGCTCTTCTTTCGGTA CACTCTCTTTCTCATGTTGTTTGTTCCTTTGGTTTAAAACCTTGAGCTTAGAAAAAGGTATAGTCTTTGATGGTGGGGTTTGTAAATTTTATTTTGGGTC AGCTTTGGGGTATTCAATTTAATTTAATTTCACTCTGAAATGAGGTTGCAGAACTGGGTCGTTGGAATTTTATGATTTACTTTGCCAAGTTAGTTCTTGT TGGTATTATAAGGTATTAGTTGATTTATGTTGGAATTTAATATTAAAATAGGTATTAATTGTTGTTGGAATTTGGTAGAGAAGAAGTGTGAAATAAAATA TTTGAGTTTTTCAGTCATGTGATGTGGTAATTGTAGCATATTAAGGAGATTTAACTGGACTAGGGGTTAATTACACATAGATTGATGCTCTTCCTCTCTT TTATCATATAGACATATACTATTTGCTGAACATGATATACTTGAGTTGGGCTTATTGTTTTGACTACTATATTTAGGTGCCTTTAATCAATTATATTTTA TTTTGCTGCCTTTTTAATATTTTGGAATGAGGTTGATTTGTTCAAAAGCTGTTATTTTTCTGGTGCGCACCAAGGGTGTCTGTCAGCCAACAGCCAAAGA CTAACTCATTCGAGGATGCGAGATTGTCGAAGTGGATACAATCTTGCCCGACAAATTATTTTCCATACAAACAGCAGGGATTTAACCCCGAACATAACGC TTATGGAACCCAATTATTTTTTAAATGTGCTAGGCCTTGTTGCATGTCTTCTCTGATGACTTTAAGTGGTTCTCATTACCCAGTGATGTTCTAGTGGTAG TGCAGTTTTAATTGCGCCTTACTCTTTCTATCCATAAAAAAATGGATGTTGATGCTTTTAGATTTGCTTATTGGTTTCAATATTTATGCCATGAGAAAAG GATTCATTCGATGACACTTCTATTTTAGGTAAATTCTTAATAGTCCTGGTCAACATGCAGATATCTTCTTGCAAAATTAACCCTCTCTTGCATTTCAATT TTGCAAACTAAATTAGACTCTAGATCGTTCAAAAGAAACTAGCGAAGTAATGTCATCCTCTGAATCTTGCCAGTAAACCAGGGCATGAAATGATAATTGA TAACACTTGTTGATTAGGTGAAGAATATTTTGCGTTAACCCATTCCACCAAACCACCTGTACTGGATATCTCCTTGGAGGTCTCGTTCTTAATATAAAAG GATACATTTTGAATGGCCAACTAGTGGCTGGTTAAGTGTTCTGAACAGTACTTGCAAGATTGGGTTTTGGAGTAACCGGGTGTGATATATATTGGAGAAA ATTCAGGCGTAGAACAACTAGGGATTGATGTGTAGAAAATGAAAGACACAGGTTTAATGCTTTCTTTCGTGGAAATCAAATCTGGTTGTTGTTAAAATCC TGGTAGCGAATGATACAAAAATAACCAAGATACAAATGGTGTTAGGCATAATGCCCAAGAGAAAGAGGAAAACAGTTTTCCTTAATCATTTATTCATATA CTGTTTTTCTCTAATGGTATTTCAACACTGATTTGGAGGTAGGACACTCCTGGTACTCTGTGGATGCTGCTGCTCTAGGTAAGGCAGTAGAATTGGAGGG GCATATCTACAAAAGGCACTTCCACGATGCTCAAGTTAGAGGTCAAATTAGTATGCAAGTGTGTGATGGTAGATCACATCTGAGGGGGTTGAGAGATGGT AACCCTAAGATGCCGTGATCCCAATGATTTAGTGATTGAGGTGATTTTATCCCTTAATGCCCGATTTCGAGAGAGATGATGTCATTTTGTCAGCCCTCTA AATGATACTTTTTTATCTGGTGACGTACAGATAGCCTGAACCAAAATCCTAGTCTGATACACATTCATGGCTTGTGACATCATATCACTTGCATAGGACT AGTCAAACTTGGGTACAACTTAATGTACAAGTTATGTGACCAGCCTCTGCCAAACATTCATAATATCCTACATAACAAATTCAAGTGGTGGCTTTCTGTG AATTCGTTTTTGGAAGGGAAGGGAGGGAAAGGGACGGCTTAGGAACACACTACCTTTCCCCCAAAATCCAGCTCGCAAGCATATCTTAAAGGAAAAATAA TCATATGTATAGTATACAAATGGGTTGATACCATTGGATTTGTGGTTGAGAGAAGGACAAGTTTTCAAAATTTGCATACCATACCATTTGAATATGGAAA GTCTATTGGATTTCCATGCCAATTCTGAGCTTATCATGCTTTCTTGATTTTATTGCTTTTTACTGAAATGCTAAATTGTCATCCCTAGAAAGATTATCTG TAGATCTGAAAGTAGATGTCCCTTCTCCTTTCTCATAATGTAGATATAATAAACCGTGATGTCAATTTGTTATGCTGCAGAATTAGCATAGAAAATGAGT ACGTTGGATGCAACTAGGGCAGAACTTGCTCTTCTAGTTTTATATTTGAATAAGGCTGAATCAAGGGACAAGATATGCAGGGCAATACAATATGGTTCCA AATTTTTAAGTGATGGTCAACCTGGTACTGCACAGAATGTGGACAAGTCAACCAGCTTGGCACGGAAAGTTTTCCGTCTATTCAAGTTTGTCAATGACCT GCATGGTCTGATAAGTCCAACTGCACAGGGTACCCCTCTCCCCTTAATTTTTTTGGGAAAGTCCAAGAATGCATTACTGTCCACTTTCTTGTTTCTCGAT CAATTCGTCTGGCTTGGCAGATCAGGAATCTACCAGAATAAAGAACGAACTGAACTAATTGGCCGGATATCTCTTTTCTGTTGGATGGGTTCTTCAGTGT GTAGCACCTTGGTTGAGCTTGGGGAGCTTGGAAGACTTTCTGCATCAATGAAGAAGATAGAGAAAGAACTCAAAAACAGCAATAAATATGATAATGAGCA ATACAATGCTAAACTTAAAATATCAAATGAGAGAACTCTATCACTTATCAAAGCCGGCATGGATATAGTGGTAGCAGTTGGATTGCTTCAATTGGCACCC AAGAAAGTGACTCCTCGACTGACCGGGGCGTTTGGATTTGTGACATCTTTAATATCCTGCTATCAGTTGCTTCCCGCCCAGGCTAAGTCCAAAACATCAT GAAGAAGGAAGAACAGATTGGTTATTGACATGCTTACAATGTTGTTAAATAATTATATGAACTATCAGTAAATGTTGTTAAATAATTATATGAACTACTG GTAAATGTTGATTAGTGTAAGCTTGATCTACTTGCTGACCTTTTAAGGTATTTGAAATGTCATTATAACTAGTTATAATATTGTCACAGTTCCATTTCCT TTTAGTATAAAGCATGTCCCGTTTGGTAAAAAAAAAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_163214; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_367588
Blastp | Peroxisomal membrane protein 11D from Arabidopsis with 81.97% of identity |
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Blastx | Peroxisomal membrane protein 11D from Arabidopsis with 81.97% of identity |
Eggnog | peroxisomal biogenesis factor 11(ENOG4111NS6) |
Kegg | Link to kegg annotations (AT2G45740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433953.1) |
Pfam | Peroxisomal biogenesis factor 11 (PEX11) (PF05648.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |