Id Trinity | TRINITY_DN48682_c0_g1_i5 |
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Name Transcript | Ll_transcript_369816 |
Sequence | CACTTTTATTACACTCACCTGAGTTATCTCTCTCTTCACTTGGTACTTTCTTCACTCTTCAAACTCATTGCTCTATGTAGATCCAGGCTTTCGATAATGA TAGACCGTCCTCTCTACGGATATAGTATGTTGTATATGAGAGATGTGTTTTGTTAAATAACAACATGTTGAATTAGTATGCTACGTGGACAATGGCGCAA CTTATAAAATGATGCTTAAAACTTGATATAAGGGAAAGGAAATCGAAAGTCATGGAGGAAATACAGTCTCAATCAGATAATTATCGGTCCTCATCATCGT CAGCAAGCAGCCCGGCGAGTAGGGTGCCATCGAGTAACTTCTTCTACCTGCGTAAACCCGGTTCACTCAGGCAGCCCATCTCATTTGAGGATTCACCTGA GTGGGAGGACACTGATGTCGATGTTAGAGTTGACGACGGAGGTGACTCCATCAATGCTGCAACAACTCCAGCCTCCCCTTCTCTCTCTAAGCTCAATAGT GGCTCCTTGCCGTCCCCGCATCTACCGGAGGGTGCAGTTATTCCACGGAAAATTGCAGGGGCTTCTGTTGCCTGGAGAGATTTGACTGTTACAATAAAGG GGAAAAGAAAGTACTCTGATAAGGTTATTAAGAGTTCAACTGGTTATGCATTACCTGGTACAATGACCGTGATTATGGGCCCTGCTAAATCAGGAAAATC AACCTTATTACAAGCCATCGCAGGAAGATTGCATCCTTCAGCCAGAGTGTATGGGGAAGTGTTTGTGAATGGGGGAACATTGAAAATGCCGTACGGATCA TATGGTTATGTGGAGAGAGAAACCACCCTGATTGGGTCTCTCACTGTACGAGAGTTTCTGTATTATTCAGCCCTTCTTCAACTTCCTGGTTTCTTTTGTC GGAAAAAGAGTGTGGTAGAGGATGCTATACACGCCATGTCGTTAGGTGATCATGCAAATAAACTTATAGGGGGGCATTGTTATATGAAGGGACTTCCTAG TGGCGAGAAACGACTTGTTAGCATTGCCCGGGAGCTTGTTATGAGACCGCGTATCTTGTTTTTAGATGAACCACTTTATCATTTGGACAGTGTCTCGGCA CTTTTGATGATGGTTACATTGAAGAGACTCTCAAGCACTGGTTGCACTCTTATCTTGACCATTTATCAGAGCAGCACTGAAGTCTTTGGCTTTTTCGACC GTATATGTTTGCTTTCGAATGGAAACACCCTGTTCTTCGGAGAAACATTAGCTTGCTTGCAGGTAACTTTTATACCACTCGAAATTTGATTAGGGAATAG ATAAGGAATCCGGTTTAGGCATTGATTTTTATGTTTCATAGGGTAATTATTGAAAAGTGGTTGTTGGAAGTTGAAGTCGTGTCTGTTCCAAGATTATCAA GAACTTTGCTTATCTTTTTTTGCTTACCTTCTCTGCTACTGATGAGAACTTATCTTCTTTCTTACTGCTATAATTTTATGTTGATGAAGCACTTCTCAAA TGCTGGATTTCCTTGCCCAATCATGCAAAGTCCTTCCGATCACTTTCTACGTGCCATTAATACAGATTTTGACCGGATTATTGCAATGTGTAAAAACTGG CAGGATGACAATGGAGATTTTTCTTCTGTAAACATGGACACTGCTGTTGCTATACGCACACTTGAAGCAACTTATAAGTTATCTGCAGATGCAGCTGCCG TTGAAACTATGATTTTGAAACTCACTGAGAAGGAAGGTCCAGCTCTCAAAACCAAAGGCAAAGCTAGCAATGCTACTCGGGTTGCAGTGTTGACATGCCG ATCCTTGTTAGTTTTGTCAAGAGAGTGGAAATATTATTGGCTTCAACTTATTCTTTACGTGCTGCTCACTCTGTGTATCGGTTCCGTATTCTCTGGGTTG GGGCATTCTCTGTCCTCAGTTGTGACAAGAGTTGCCGCAATTTTTGTATTCGTATCATTTTGTTCCCTTCTAAGCATTGCTAGGCTGCCTGCACTTTTAA AAGATATCAAGGTATATGCATGTGAAGAGTCAAACCAGCATTCCAGTACATTAGTATTTTTACTCGCGCAGCTCTTCTCCAGCATCCCATTTCTTTTCCT CGTCTCCATTTCATCGAGTCCAATCTTTTACTTCCTCGTGGGACTGGAAAATCACTTCGTCTTGTTAATGTACTTCGTGCTCAATTTTTTCATGACCCTG C BLAST |
Tissue | pods |
Gene name | LI_gene_163216; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369816
Blastp | ABC transporter G family member 3 from Arabidopsis with 82.32% of identity |
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Blastx | ABC transporter G family member 3 from Arabidopsis with 79.11% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT2G28070) |
CantataDB | Link to cantataDB annotations (CNT0002717) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458827.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |