Id Trinity | TRINITY_DN48685_c3_g2_i6 |
---|---|
Name Transcript | Ll_transcript_368077 |
Sequence | TGGATGAACCTGGTGCCTGGGTGGGTCGGTCCATGTGAAATATAAAAGAAAATAAAAGTTTGGAGAATTGTAGAAGCAGGAAGAGAGTAATGAAGAGTAT TGAATACCTTTCATTGTTTGAGACAAGTAGAGGTAGAGGATGGTTTATCCGCAGAGTATTTTCAGTCTCAATGTTTGTGGCCATATGCTTCATATGGCTT TTCAGATTGAGCCATATTCCACTCATCATAAAGGCTCAACAATATAGATATTCATATTGGACTTGGCTTGCTTTGCTTGCTTCAGAACTATGCTTCTCTT TCAGTTGCCTCTTCACAAAAGCCCTCAGATGGAACCTTATCTTCAGGAAAACCTTCAAAACTAGCCTCTCTCAAAGATATGAAGATAAGAGTTTGCCGAG AGTGGACATATTTGTGTGTACGGCGGACCCGGATATTGAACCACCAATAATGGTGATAAATACAGTGTTATCTGTTATGGCTTATGACTATCCAGCTGAG AAAATTAGTGTGTATCTCTCTGATGATGCTGCTTCTGATATCACTTTCTATGCACTTTTAGAGGCTTCTACTTTTGCTAAACATTGGTTACCATTTTGCA AGAAATTCAAGGTGGAACCTACTTCACCTGCTGCTTATTTTAATACCCTTCATCACTCAACAACTTATCCACAAAACCTTGATCAATATGCAAAAGACTT GGAACTCATCAAGGTATAACAAAATCATATATTAACTAACCAATTATCTCAAAGTTCAATATGTTTGGAGGTGACTTTTGTTAAGGTTACGTCTCAAAAC CAACTAGCAATAAGAGGAGTAGCCTACCAGGTATTTAAATTATTTCCGAGACAACGAGGTAGGCAATGTGGAACTTAATTTACAATAATTTTTTGTATAT GAAAATTTCTAATAGGTCCCTAACTATTGATATGTCTTTGTTGTTTGGTATGGGTACATTTAATGTTGTAGAAATTATACGAAGATATGAAAATAAGAAT AGAAGATGCAGCCAAGTTGGGGAATGTGCCTAAGGAAATACGTTCAAACAATCACAGATTTTCTCAGTGGGATTCATATTCTTCTCGACGTGACCATGAC ACAATTCTTCAAGTATTTTACTTTCTCACGTTTTCTTACATAATATATACATCTTTGGCAGAATAATATATGGTAGGTTATTGATATATAGTTTTTTTTC AAACGGGTTTTGCAAAATGCTTCTATAAGTATAGTTTTGTAACTCTTTGGAAAATATATGTAAAATTTGGCTTTGTTATAAAAAAAAGCAGATTACAACT TTTATAGGGAGAAGTTATAGATTTTGTCATCTTATAAAACTTCTATTGATACATTTCTCTTGTCCTTTCATTTTATTATTACCAGATACTACTTCATAAA AACGACAAGCATAATTCTAAAGATGTAGATGGATTTATTTTGCCAACACTAGTGTATTTGGCTCGTGAGAAGAGACCTCAGATTCACCACAATTTCAAAG CTGGTGCCATGAATGCTTTGATAAGGGTGTCTTCAAATATTAGCAATGCAAAAGTGATTCTAAATGTAGATTGTGACATGTACTCAAACAATTCACAATC AGTGAGAGATATTCTTTGTTTTTTCATGGATGATGAGAAAGGCCATGAATTTGCATATGTGCAGTATCCACAGCATTTTGAAAATCTCACCAACAATGAT TTATATGGGAATGCTATGTTTATACCTAGTCAGGTGGAGCTCCATGGTGCAGATGGTTATGGTGGCCCTATGTATATTGGAACTTGCTGCTTTCATAGAA GAGATGCTCTATGTGGAAAGAAGTATGATAGTGGATACAGGATTGATTGGAAGAGTGAGAATGACCATGCCATAGAATCAAATTTGCAAGAACTAGAAGA AAAATCAAAAGCTTTAGCAAGCTGCACTTATGAACAAAACACTCAATGGGGAAAAAAGATGGGTTTAAGATATGGTTGTCTAGTAGAGGATGTGATAACA GGATTTTCAATACAATCAGAAGGATGGAAATCAGTGTACTATAATCCAATGAAAAAGGGTTTCTTAGGCCTTGCTCCAACCACTTTGCTTCAAATACTTG TTCAACATAAGAGATGGGCTGAAGGTCATTTTCAAATATTGTTTTCTGACTACAGTCCTTTGTGGCATGCTCCTGGAACCATCAATATTGGTCTAAGAAT GGGTTATTTGCACTTTAACTCATGGGCAACTACCTCTTTGCCAATTCTATGTTACTCCATTATCCCTTCACTCTATCTCCTCAAAGCCATTCCATTGTTC CCTAAGATATGTAGCCTATGGTTTATACCATTTGCATATGTAATACTTGGGGAGAGTATTTACAGTTTGGTAGAGTTTATGATATTTGGAGGCACAATTC AAGGTTGGTGGAATGATCTAAGGATGTGGTTGTATAAAGGAACAAGCTCTTATCTTTTTGCTTTCATAGACAACATCTTGAAATTCTTTGGGCTATCAGA TTCACCCTTTACAATCACAACTAAGATCATGGATGAAGATGTTTGTCAACGTTATGAGAATGAAGTTATGGAGTTTGGAGCATCTTCTCCATTCTTCACT ATATTAGCAACACTTGCATTGTTCAACTTGTTTTGCTTACTTTCCACTTTGAAGGAGTTGGTCCTTGGTGAAGATGGTTTTAGAGTTTATGAGGAAATGG TGTTGCAGATTCTGTTGTGTGGTTTTCTAGTTTTCATCAATTTTCCAATATATCAAGGACTTTTCTTAAGGAAGGATAAGGGAAGATTGCCAACCTCTCT TGTTATTAAATCAACAGCATTGGCTCTTGGTGCATGCATTATCTCCAAAATTCTCACATGATGAAATTCAGTACTGTTTCATTATTGTGTATATTATTTT GATGTAATGTTTATAATGAAATAAGATGAACAACGTGATTGGTTTAAGTGTTACATATTTGATTTCCCTTAAGCAAGATCTCAG BLAST |
Tissue | pods |
Gene name | LI_gene_163231; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_368077
Blastp | Cellulose synthase-like protein E1 from Arabidopsis with 54.63% of identity |
---|---|
Blastx | Cellulose synthase-like protein E1 from Arabidopsis with 55.16% of identity |
Eggnog | cellulose synthase-like protein(ENOG410Y931) |
Kegg | Link to kegg annotations (AT1G55850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435697.1) |
Pfam | Cellulose synthase (PF03552.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |